[Biojava-l] Blast2HTML parser problem

[elenges]

Hi,

I use the biojava Blast2HTML package but I reached an error when
executing a BLAST of m12345 on RefSeq_RNA Mouse. (Alias DB)

After the last result is a part like this:

  Subset of the database(s) listed below
     Number of letters searched: 2,879,183,620
     Number of sequences searched:  59,079

And it seems that the parser is not able to handle this part but only
the "normal" part beggining with Database like :

  Database: RefSeq_mm AliasDB: Mus musculus subset of NCBI Reference
  Sequences Rel.5+ (23May2004). Formatted 23May2004.
    Posted date:  May 23, 2004  9:41 PM
  Number of letters in database: 2,724,797
  Number of sequences in database:  1306

When I remove the "Subset ..." part it works fine.

Is it planned to handle this case or perhaps I don't have the correct
version of the BLAST SAX Parser?

Many Thanks in advance for your response,

elenges


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