[Biojava-l] Serialization of SequenceDB obtained from Swiss-Prot
mark.schreiber at agresearch.co.nz
Tue Nov 18 15:14:48 EST 2003
I'm not sure serializing an entire SequenceDB is a good idea, however, can you tell me if the serialization is failing on the DB or one of the sequences in it?
> -----Original Message-----
> From: Vasa Curcin [mailto:vc100 at doc.ic.ac.uk]
> Sent: Tuesday, 18 November 2003 11:28 p.m.
> To: biojava-l at biojava.org
> Subject: [Biojava-l] Serialization of SequenceDB obtained
> from Swiss-Prot
> There seems to be some problem with serializing SequenceDB objects
> obtained from SwissProtDatabase. The error is:
> java.io.WriteAbortedException: writing aborted; java.io.NotSeria
> at java.util.HashSet.readObject(HashSet.java:272)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> I am using Biojava 1.30, with Mark's patches from a few weeks back.
> Anyone has an idea?
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