[Biojava-l] how to do multi-lined feature display

[Patrick McConnell]

Let me be more specific.  I want to be able to reproduce something like
EnsEMBL, where I have one sequence and multiple tracks of features.

Specifically, I have a sequence and a bunch of blast hits from different
databases.  I also have some other data, such as quality scores for the
sequence, that I need to build custom renderers for (which will come
later).

I think I need to use the  MultiLineRenderer in conjunction with a
SequencePanel, but I cannot figure out how to get multiple tracks of
annotations.  Do I need to add Features to the Sequence in a special
manner?

Any guidance would be appreciated.

Oh, and I noticed that there is a demo on the BioJava site similar to what
I want to do called SequenceViewer.  Is the source for this available?

Thanks!

-Patrick






"Patrick McConnell" <MCCon012 at mc.duke.edu>@biojava.org on 03/25/2003
12:54:46 PM

Sent by:    biojava-l-bounces at biojava.org


To:    "biojava-l at biojava.org" <biojava-l at biojava.org>
cc:

Subject:    [Biojava-l] how to do multi-lined feature display

Hi.

I need to display some features on different lines.  I have read the "How
do I display features" at BioJava in Anger, and I have fiddled around with
the code for a couple hours, but I am making no headway.  Could someone
point me in the right direction?

Thanks,

-Patrick


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