[Biojava-l] How to extract a Sub-sequence

Y D Sun Yudong.Sun at newcastle.ac.uk
Tue Jul 8 13:12:42 EDT 2003


Dear all,

Is there a method in BioJava that returns a sub-sequence using a
Location parameter (not subStr() or subList() with two integers - start
and end)? This consideration comes from my requirement to get the
nucleotide sub-sequence corresponding to a CDS section. In such a case,
the subStr(start, end) method cannot always return the sub-sequence
correctly.

Thanks.

George



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