[Biojava-l] Problems in compiling biojava-live

[Sylvain.Foisy]

Hi,

I have some difficulties compiling biojava-live for the past couples of 
days, both on my Linux WS at work and my PowerMac G4 at home. On both 
machines, ant gives me the same warnings:

[javac] /Users/foisys/biojava-live/ant-
build/src/main/org/biojava/bio/seq/io/GAMEFormat.java:37: package 
org.biojava.bio.seq.io.game12 does not exist
     [javac] import org.biojava.bio.seq.io.game12.*;
     [javac] ^
     [javac] /Users/foisys/biojava-live/ant-
build/src/main/org/biojava/bio/seq/io/GAMEFormat.java:73: cannot resolve 
symbol
     [javac] symbol  : class GAMEHandler
     [javac] location: class org.biojava.bio.seq.io.GAMEFormat
     [javac]             GAMEHandler handler = new GAMEHandler(listener);
     [javac]             ^
     [javac] /Users/foisys/biojava-live/ant-
build/src/main/org/biojava/bio/seq/io/GAMEFormat.java:73: cannot resolve 
symbol
     [javac] symbol  : class GAMEHandler
     [javac] location: class org.biojava.bio.seq.io.GAMEFormat
     [javac]             GAMEHandler handler = new GAMEHandler(listener);
     [javac]                                       ^
     [javac] /Users/foisys/biojava-live/ant-
build/src/main/org/biojava/bio/seq/projection/ProjectionEngine.java:239: 
make_return() in org.biojava.utils.bytecode.ByteCode cannot be applied 
to (org.biojava.utils.bytecode.GeneratedCodeMethod)
     [javac]                 Instruction returni = 
ByteCode.make_return(proxyMethod);
     [javac]                                                   ^
     [javac] Note: Some input files use or override a deprecated API.
     [javac] Note: Recompile with -deprecation for details.
     [javac] 4 errors

BUILD FAILED

Anybody has a clue about this?

Cordially

Sylvain

++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Sylvain Foisy, Ph. D.
Directeur-Operations / Project Manager
BioNEQ - Le Reseau quebecois de bioinformatique
Universite de Montreal/Genome-Quebec
1260 Crescent, Bureau 201
Montreal, QC
Tel.: (514) 878-9911
E-mail: sylvain.foisy@bioneq.qc.ca
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