I am looking for some software that will convert a Consed assembly file into Sequencher(From GeneCodes) format. Barring that, I would like to convert it into CAF format so that sequencher can at least import the data AND show chromatagrahms. Has anybody worked on this in Biojava? -Robin Robin Emig Bioinformatics Project Lead Maxygen, Inc robin.emig@maxygen.com