[Biojava-l] Re: [Bioperl-l] Re: SP-ML Draft released (fwd)
Guoneng Zhong
Guoneng.Zhong@med.nyu.edu
Tue, 5 Mar 2002 12:15:44 -0500
Hmm, I would like to write or rewrite existing java libraries pertinent
to the SwissProt database. How do I participate and what sort of
cvs-kind of setup do I need? Or maybe someone else already signed up
for it???
G
On Tuesday, March 5, 2002, at 10:59 AM, Ewan Birney wrote:
>
>
> Apologies for the cross posting again to the bio* projects
>
>
>
> Swissprot is developing a XML markup for swissprot which is such a big
> step forward away from having to column count comment lines I think it
> is
> great! I think it is perfectly sensible that swissprot is using their
> own
> format as they really want to cleanly represent what they know --- I
> think
> it is the job of the Bio* projects and/or XSLT hackers to map this into
> Agave/BSML/whatever-your-favourite-xml is.
>
>
> URL below.
>
>
>
> I'm going to look into a bioperl SeqIO parser. I wonder if Java and
> Python
> want to look into their parsers for this.
>
>
> Kai, Wolfgang and the general swissprot crew I think would be interested
> in feedback on the format. sp-ml@ebi.ac.uk is the place to post.
>
>
>
>
>
>
>
> Hi Ewan,
>
> Here is the URL and some examples:
> http://www.ebi.ac.uk/swissprot/SP-ML/
>
>> On Tuesday, March 5, 2002, at 02:03 , Kai Runte wrote:
>> Please send questions, suggestions, etc. to:
>> SP-ML Team <sp-ml@ebi.ac.uk>
>
> Thanks,
> Wolfgang
>
>
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