[Biojava-l] adding toSequenceIterator method for Alignment
Wed, 17 Jul 2002 18:38:20 +0100
Would this method return an iterator over each sequence in the
alignment? Sounds usefull to me. I have always taken an iterator over
the labels and fetched each sequence from the alignment by each of these
One issue - alignments are defined as being over symbol lists, not
sequences. Does this break things?
You can find all classes implementing Alignment by greping the source
tree for "implements Alignment" - I can only find
org.biojava.bio.symbol.SimpleAlignment, but I may have missed something.
Singh, Nimesh wrote:
> What do you think about adding a toSequenceIterator() method to the Alignment interface? I think it would involve creating a new SequenceIterator implementation and updating everything that implements Alignment. I would take care of that, if you guys could tell me every new class that implements Alignment since release 1.21.
> Nimesh Singh
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