[Biojava-l] Encountered a Parsing Exception on Genbank
cantey.lg@pg.com
cantey.lg@pg.com
Wed, 27 Feb 2002 13:27:35 -0500
In attempting to parse the source file for Genbank accession number AB030903,
the following exception was encountered. Any ideas would be greatly
appreciated !
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org.biojava.bio.seq.io.ParseException: LOCUS line incorrectly tokenized [LOCUS AB030903 1441 bp linear VRT 15-AUG-2000]
at org.biojava.bio.seq.io.GenbankContext.parseLocusLinePost127(GenbankFormat.java:611)
at org.biojava.bio.seq.io.GenbankContext.processHeaderLine(GenbankFormat.java:521)
at org.biojava.bio.seq.io.GenbankContext.processLine(GenbankFormat.java:372)
at org.biojava.bio.seq.io.GenbankFormat.readSequence(GenbankFormat.java, Compiled Code)
at org.biojava.bio.seq.io.StreamReader.nextSequence(StreamReader.java:100)
rethrown as org.biojava.bio.BioException: Could not read sequence
at org.biojava.bio.seq.io.StreamReader.nextSequence(StreamReader.java:103)
at seq.UpdatedTestGenbank.main(UpdatedTestGenbank.java, Compiled Code)
Process exited with exit code 1.
Best Regards,
Larry Cantey