[Biojava-l] ClustalW enquiry

[suyee]

Hi,    
  I am Su Yee, a polytechnic student from Singapore. Currently,
i am doingon a project on ClustalW.
  can anybody tell me how to use Java call the clustalw.exe and
pass in all the parameters needed as i dont have enough time to
convert all the clustalw C code into Java Language.
   Besides that, i still unclear with the pairwise alignment -
fast/approximate part, is there any tutorial/ website i can
refer to.
   Ur feedback is value to me, Waiting for ur answer.  
   Thanks a lot.Lee Su Yee

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