[Biojava-l] Build failing

David Waring dwaring@u.washington.edu
Tue, 10 Dec 2002 16:20:47 -0800


I got the following errors when I tried to build biojava-live

compile:
    [javac] Compiling 799 source files to
V:\dwaring\cvs\biojava-live\ant-build\
classes\main
    [javac]
V:\dwaring\cvs\biojava-live\ant-build\src\main\org\biojava\bio\seq\i
o\filterxml\XMLFilterWriterConfig.java:198: interface expected here
    [javac]     private static class BlankFilterWriter implements
XMLFilterWrite
r {
    [javac]                                                       ^
    [javac]
V:\dwaring\cvs\biojava-live\ant-build\src\main\org\biojava\bio\seq\i
o\filterxml\XMLFilterWriterConfig.java:217: interface expected here
    [javac]     private static abstract class PropertyFilterWriter
implements XM
LFilterWriter {
    [javac]
^
    [javac]
V:\dwaring\cvs\biojava-live\ant-build\src\main\org\biojava\bio\seq\i
o\filterxml\XMLFilterWriterConfig.java:313: interface expected here
    [javac]     private static class AndFilterWriter implements
XMLFilterWriter
{
    [javac]                                                     ^
    [javac]
V:\dwaring\cvs\biojava-live\ant-build\src\main\org\biojava\bio\seq\i
o\filterxml\XMLFilterWriterConfig.java:340: interface expected here
    [javac]     private static class OrFilterWriter implements
XMLFilterWriter {

    [javac]                                                    ^
    [javac]
V:\dwaring\cvs\biojava-live\ant-build\src\main\org\biojava\bio\seq\i
o\filterxml\XMLFilterWriterConfig.java:112: cannot resolve symbol
    [javac] symbol  : class IsTopLevel
    [javac] location: interface org.biojava.bio.seq.FeatureFilter
    [javac]                 FeatureFilter.IsTopLevel.class,
    [javac]                              ^
    [javac]
V:\dwaring\cvs\biojava-live\ant-build\src\main\org\biojava\bio\seq\i
o\filterxml\XMLFilterWriterConfig.java:185:
writeFilter(org.biojava.bio.seq.Feat
ureFilter,org.biojava.utils.xml.XMLWriter) in
org.biojava.bio.seq.io.filterxml.X
MLFilterWriter cannot be applied to
(org.biojava.bio.seq.FeatureFilter,org.bioja
va.utils.xml.XMLWriter,org.biojava.bio.seq.io.filterxml.XMLFilterWriterConfi
g)
    [javac]                 xfw.writeFilter(ff, xw, this);
    [javac]                    ^
    [javac]
V:\dwaring\cvs\biojava-live\ant-build\src\main\org\biojava\bio\progr
am\das\DASMergeFeatureHolder.java:35: cannot resolve symbol
    [javac] symbol  : method getMergeMap  ()
    [javac] location: class
org.biojava.bio.program.das.DASMergeFeatureHolder
    [javac]     Map mm = getMergeMap();
    [javac]                  ^
    [javac]
V:\dwaring\cvs\biojava-live\ant-build\src\main\org\biojava\bio\progr
am\das\DASMergeFeatureHolder.java:48: cannot resolve symbol
    [javac] symbol  : method getMergeMap  ()
    [javac] location: class
org.biojava.bio.program.das.DASMergeFeatureHolder
    [javac]     Map mm = getMergeMap();
    [javac]                  ^
    [javac] Note: Some input files use or override a deprecated API.
    [javac] Note: Recompile with -deprecation for details.
    [javac] 8 errors

BUILD FAILED
file:V:/dwaring/cvs/biojava-live/build.xml:281: Compile failed; see the
compiler
 error output for details.

Total time: 1 minute 27 seconds