[Biojava-dev] Scop page seems to be gone, build is broken.

[Andreas Prlic]

Hi Steve,

I have not tried it yet, is anything broken for you? The last few times
they kept the files exactly the same, so it was easy to switch between
versions...

Andreas


On Mon, Oct 14, 2013 at 1:18 PM, Steve Darnell <darnells at dnastar.com> wrote:

> Greetings,
>
> I read in the PDB mailing list that SCOP and ASTRAL were updated to
> version 1.75C last Thursday (10/10/2013). Did they make any changes to
> break to Scop services in Biojava?
>
> ~Steve
>
> -----Original Message-----
> From: biojava-dev-bounces at lists.open-bio.org [mailto:
> biojava-dev-bounces at lists.open-bio.org] On Behalf Of Andreas Prlic
> Sent: Sunday, October 13, 2013 11:28 PM
> To: John Chilton
> Cc: biojava-dev at lists.open-bio.org
> Subject: Re: [Biojava-dev] Scop page seems to be gone, build is broken.
>
> Hi John,
>
> yes, you are right, it looks as if SCOP is currently down. Uncommenting
> the junit test is prob a good temporary fix, until they are back online
> again.
>
> Andreas
>
>
> On Sun, Oct 13, 2013 at 9:05 PM, John Chilton <jchilton22 at gmail.com>
> wrote:
>
> > ATTN Andreas Prlic, you are listed as an author on ScopInstallation.
> >
> > I'm trying to do a "mvn install" to run tests and generate a working
> > jar but getting the following:
> >
> > Tests in error:
> >   ScopInstallationTest.testComments:41 ? NullPointer
> >
> > Debugging the test found that the Scop file download location seems to
> > be down (the ScopInstallation class tries to download "
> > http://scop.mrc-lmb.cam.ac.uk/scop/parse/dir.com.scop.txt_1.75").
> >
> > Indeed, even the link to the homepage from Google is down. I will keep
> > trying through the week, but in case the page is actually gone, how
> > would you like to proceed?
> >
> > I will comment out this test for now.
> >
> > John Chilton
> > _______________________________________________
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> > biojava-dev at lists.open-bio.org
> > http://lists.open-bio.org/mailman/listinfo/biojava-dev
> >
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