[Biojava-dev] explicit support for GVF format

Michael Heuer heuermh at gmail.com
Mon Apr 23 16:55:55 UTC 2012


Hello devs,

I know we have GFF support in biojava-legacy and also in biojava3
already; I wonder if it might be worthwhile to add explicit GVF/GFF3
support per this specification

Genome Variation Format 1.06
http://www.sequenceontology.org/resources/gvf.html


We may also want to remove this snarky comment from the biojava3
GFF3Reader javadoc

"The GFF moniker is applied to a variety of tab-delimited formats that
mock the notion of a standard."

:)

   michael



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