[Biojava-dev] bytecode

Schreiber, Mark mark.schreiber at agresearch.co.nz
Mon Apr 14 11:57:05 EDT 2003


Hi -
 
Can I put in a request for semi hidden markov models or states with a "time spent in state" distribution if your not too busy :)
 
- Mark
 

	-----Original Message----- 
	From: Matthew Pocock [mailto:matthew_pocock at yahoo.co.uk] 
	Sent: Mon 14/04/2003 9:25 a.m. 
	To: biojava-dev at biojava.org 
	Cc: 
	Subject: [Biojava-dev] bytecode
	
	

	Hi,
	
	I've been poking arround in the bytecode package.
	CodeGenerator now has two methods - stackDepth() and
	stackDelta() that let us calcualte a stack depth for
	methods (or macros). This lets us chose a sane stack
	depth for methods when making the class files -
	hopefully removing David's errors.
	
	BioJava compiles against this new bytecode.jar, but
	could  people take this for a spin before we commit it
	to biojava-live - I don't want to break all our
	feature projection stuff by accident.
	
	If I get bored this comming week, I'll add in full
	support for generics / templates to the package. This
	should let us define algorithms like "sort" for any
	type and then emit the bytecode for the algorithm over
	a concrete type like "int". Should come in usefull in
	like a million little places - like in DP kernels, or
	SSAHA inner-loops, or turning math data-structures
	into code.
	
	Matthew
	
	
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