[Biojava-dev] unigene

[Matthew Pocock]

Hi,

I've checked in a 1st parse at a unigene package. We can parse the *data 
files and build annotation bundles from them, or just listen to the 
parse events. There is a single interface - UnigeneCluster - and a tools 
class. Also, there's a demo under demo-1.4/unigene that shows how to use 
the parser.

I will probably be working on this over the next couple of days to 
provide a bridge to the text files you get when you download unigene. 
This will probably involve getting our flat-file indexer working as I 
don't fancy loading 7.3G of data files into memory.

If anyone has any thoughts about what the unigene API should look like, 
now's the time to shout.

Matthew
-- 
BioJava Consulting LTD - Support and training for BioJava
http://www.biojava.co.uk

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