[MOBY-dev] JMoby bug or lack of knowledge

[Edward Kawas]

Have you generated the datatypes first? Anytime you see the ignoring unknown
element ... that means it cant find the datatype definition.

Eddie

> -----Original Message-----
> From: moby-dev-bounces at lists.open-bio.org [mailto:moby-dev-
> bounces at lists.open-bio.org] On Behalf Of "Guillermo Comesaña."
> Sent: Wednesday, March 28, 2007 6:42 AM
> To: Core developer announcements
> Subject: [MOBY-dev] JMoby bug or lack of knowledge
> 
> 
> Hi everybody and sorry for possible troubles...
> ...but, does somebody know to say why can i get this following:
> 
> 27816 [main] WARN  MobyParser - Ignoring unknown element 'LogEvent'.
> 27822 [main] WARN  MobyParser - Ignoring unknown element 'LogEvent'.
> 27825 [main] WARN  MobyParser - Ignoring unknown element 'LogEvent'.
> 27829 [main] WARN  MobyParser - Ignoring unknown element 'LogEvent'.
> 27832 [main] WARN  MobyParser - Ignoring unknown element 'LogEvent'.
> (...)
> 
> I have as many lines with this warning as LogEvent objects and I get it
> after locally executing my service with
> 
> me at mymachine$ run-service -service getLogReport -mobye $ENDPOINT
> -mobyuri $MOBY_URI -class JLogReport -xml testlog.xml -showxml -outxml
> 
> The class JLogReport implements the service generated as skeleton in
> JLogReportSkel and my dashboard yielded the LogEvent class. Previously
> to all those "moby warnings" the output of the service is apparently ok
> as you can see in the following output snippet
> 
> <?xml version="1.0" encoding="UTF-8"?>
> <moby:MOBY xmlns:moby="http://www.biomoby.org/moby">
>    <moby:mobyContent>
>      <moby:mobyData moby:queryID="sip_1_">
>        <moby:Collection moby:articleName="logEvents">
>          <moby:Simple>
>            <moby:LogEvent moby:id="" moby:namespace="">
>              <moby:String moby:id="" moby:namespace=""
> moby:articleName="id">F4D83E00-B50D-11DA-9DE7-EA517071BF93</moby:String>
>              <moby:String moby:id="" moby:namespace=""
> moby:articleName="serviceName">runPhylipNeighbor</moby:String>
>              <moby:String moby:id="" moby:namespace=""
> moby:articleName="ip">193.146.190.95</moby:String>
>              <moby:DateTime moby:id="" moby:namespace=""
> moby:articleName="end">2006-03-24T06:19:50Z</moby:DateTime>
>              <moby:DateTime moby:id="" moby:namespace=""
> moby:articleName="end">2006-03-24T06:19:50Z</moby:DateTime>
>              <moby:Integer moby:id="" moby:namespace=""
> moby:articleName="status">701</moby:Integer>
>            </moby:LogEvent>
>          </moby:Simple>
>          <moby:Simple>
>            <moby:LogEvent moby:id="" moby:namespace="">
>              <moby:String moby:id="" moby:namespace=""
> moby:articleName="id">3790E176-B512-11DA-9F9D-E262AE5C699A</moby:String>
>              <moby:String moby:id="" moby:namespace=""
> moby:articleName="serviceName">runPhylipNeighbor</moby:String>
>              <moby:String moby:id="" moby:namespace=""
> moby:articleName="ip">193.146.190.95</moby:String>
>              <moby:DateTime moby:id="" moby:namespace=""
> moby:articleName="end">2006-03-24T06:19:50Z</moby:DateTime>
>              <moby:DateTime moby:id="" moby:namespace=""
> moby:articleName="end">2006-03-24T06:19:50Z</moby:DateTime>
>              <moby:Integer moby:id="" moby:namespace=""
> moby:articleName="status">701</moby:Integer>
>            </moby:LogEvent>
>          </moby:Simple>
>      (...)
>      <moby:Simple>
>            <moby:LogEvent moby:id="" moby:namespace="">
>              <moby:String moby:id="" moby:namespace=""
> moby:articleName="id">E0A58A54-B43C-11DA-8ED1-CC6B69DB9358</moby:String>
>              <moby:String moby:id="" moby:namespace=""
> moby:articleName="serviceName">getAminoAcidSequence</moby:String>
>              <moby:String moby:id="" moby:namespace=""
> moby:articleName="ip">150.244.85.114</moby:String>
>              <moby:DateTime moby:id="" moby:namespace=""
> moby:articleName="end">2006-03-24T06:19:50Z</moby:DateTime>
>              <moby:DateTime moby:id="" moby:namespace=""
> moby:articleName="end">2006-03-24T06:19:50Z</moby:DateTime>
>              <moby:Integer moby:id="" moby:namespace=""
> moby:articleName="status">0</moby:Integer>
>            </moby:LogEvent>
>          </moby:Simple>
>        </moby:Collection>
>      </moby:mobyData>
>    </moby:mobyContent>
> </moby:MOBY>
> 
> any suggestion, idea, something...?
> Cheers in advance
> 
> w i l l y
> 
> 
> **NOTA DE CONFIDENCIALIDAD** Este correo electrónico, y en su caso los
> ficheros adjuntos, pueden contener información protegida para el uso
> exclusivo de su destinatario. Se prohíbe la distribución, reproducción o
> cualquier otro tipo de transmisión por parte de otra persona que no sea el
> destinatario. Si usted recibe por error este correo, se ruega comunicarlo
> al remitente y borrar el mensaje recibido.
> **CONFIDENTIALITY NOTICE** This email communication and any attachments
> may contain confidential and privileged information for the sole use of
> the designated recipient named above. Distribution, reproduction or any
> other use of this transmission by any party other than the intended
> recipient is prohibited. If you are not the intended recipient please
> contact the sender and delete all copies.
> 
> _______________________________________________
> MOBY-dev mailing list
> MOBY-dev at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/moby-dev