[MOBY-dev] Fixing local RDF metadata

Sebastien Carrere Sebastien.Carrere at toulouse.inra.fr
Tue Dec 18 08:31:47 UTC 2007


Bonjour Mark,

Do you talking about the "<a:isAlive>" tag ?
Because my RDF files do not contain any "mygrid:" namespaced tags:
http://lipm-bioinfo.toulouse.inra.fr/biomoby/analysis/iant/rdf/dna/iANTblastxSwissProt.rdf

Are my rdf files not correct ?

Sebastien



Mark Wilkinson wrote:
> Hi all,
>
> I noticed a little while ago that Moby Central is including the 
> isAlive tag in the metadata that it presents to the service provider 
> when they register their service.  This is bad!  The service provider 
> is not supposed to know if their service is alive or not (from the 
> perspective of the Registry) so they shouldn't have that tag in their 
> metadata.
>
> Eddie has just fixed the Moby Central code so that it doesn't do this 
> anymore, but in order to fix your metadata you would need to remove 
> the isAlive tag from each of your service instances.
>
> I did that using a perl in-place edit as follows:
>
>  perl -pi.bak -e "s/<mygrid:isAlive>\w+<\/mygrid:isAlive>//g" *.rdf
>
> It's probably worth doing, so that your local metadata doesn't 
> over-rule what the registry says the alive/dead state of your service is.
>
> Cheers!
>
> M
>
>
> ----
> Mark Wilkinson
> Assistant Professor, Dept. Medical Genetics
> University of British Columbia
> PI Bioinformatics
> iCAPTURE Centre, St. Paul's Hospital
> Tel:  604 682 2344 x62129
> Fax:  604 806 9274
>
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