[DAS2] [DAS] [Fwd: Re: Writeback implementation]

Gregg Helt gregghelt at gmail.com
Thu Oct 30 15:20:09 UTC 2008


In the DAS/2 writeback spec (
http://biodas.org/documents/das2/das2_writeback.html), the <FEATURE>
structure is the same as that returned in the DAS/2 features query, with the
single addition of an "old_uri" attribute in the writeback response.

Asia implemented things differently, and the result partly follows the DAS/2
writeback spec, but with bits of DAS1 and other things mixed in.  There's a
discussion of these changes in her master's thesis on the writeback
implementation (
http://daswriteback.googlecode.com/files/Thesis_corrected.pdf ).

On Thu, Oct 30, 2008 at 7:24 AM, Andy Jenkinson <andy.jenkinson at ebi.ac.uk>wrote:

> Gustavo Salazar wrote:
>
>> Now that all of you points about the URI field, i have notice that in the
>> Asia's implementation the attributes of the FEATURE tag have changed in
>> relation of the examples in the published protocol(
>> http://biodas.org/documents/das2/das2_writeback.html), and for example
>> there is not a uri attribute and is replaced by featureid, the example for
>> the tag FEATURE in her document is:
>>
>> <FEATURE featureid="ADCK2" featuretype="exon" method="experiment">
>>
>
> I would have expected the <FEATURE> structure to be the same as the
> features command, could a DAS/2 person comment on the difference?
>
>
>



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