[BioSQL-l] get_dblinks in load_seqdatabase.pl is deprecated

[Peter]

> Peter,
>
> Unfortunately I'm unable to reproduce this using bioperl-live and bioperl-db
> (both from Subversion):
> ...
>
> This problem is similar to one reported recently:
>
> http://article.gmane.org/gmane.comp.lang.perl.bio.general/17360

Yes, it does look very similar.

> I think the solution may have been making sure to install bioperl and
> bioperl-db from Subversion or (if you can't access it) the nightly builds.
>  Use 'sudo ./Build install --uninst 1' to remove old versions which may
> conflict.  The nightly build link:
>
> http://bioperl.org/DIST/nightly_builds/

You were right - I've installed the nightly builds of bioperl-live and
bioperl-db with the switch to remove old versions and the deprecation
warning went away.

Thanks for your help, I've closed the bug I filed as invalid:
http://bugzilla.open-bio.org/show_bug.cgi?id=2572

Peter