[Bioperl-pipeline] Genewise matters

[Elia Stupka]

> We will be passing only 2 seq objects to the genewise runnable right??
> So there is no way of passing the contig-id information isn't it?

The sequence object that you pass for the genomic sequence can be easily
named after teh contig in the fetching step.

What we need to worry about is that we also need to rempa coordinates back
to the contig coordinates wwhen storing.

Elia

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