[Bioperl-l] free software to estimate dS and dN in pairwise comparisons

[Tristan Lefebure]

If I may, within the bppSuite package (
http://biopp.univ-montp2.fr/wiki/index.php/BppSuite), the bppML program
allows to replicate codeML dN/dS estimates (and much more), tough it is
arguably a more difficult software to install and master than codeML.

Cheers,
--
Tristan

On Thu, Jan 12, 2017 at 4:07 PM, Carnë Draug <carandraug+dev at gmail.com>
wrote:

> On 12 January 2017 at 14:54, Roy Chaudhuri <roy.chaudhuri at gmail.com>
> wrote:
> > Hi Carnë,
> >
> > Not sure if you have seen this thread on the PAML Google group?:
> > https://groups.google.com/forum/#!topic/pamlsoftware/NFu_lNBoAEA
> >
> > Perhaps you could offer to help there? Professor Yang specifically
> states on
> > the website that he will not answer queries about PAML by e-mail.
> >
>
> I did see that thread.  I also saw that he hasn't replied on that
> group for a while.
>
> I did not read that on his website.  My interpretation was that it's
> ok to email him about PAML such as reporting bugs, but not questions
> about how to use the programs.  Anyway, I will add my voice to
> that thread on the google group too.
>
> Carnë
>
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