[Bioperl-l] SFF format support

Miguel Pignatelli miguel.pignatelli at uv.es
Thu Nov 4 11:13:20 UTC 2010


Thanks Chris,

I will get in touch again when I am able to hook a working module (I 
will check Biopython's Bio.Seq.SffIO)

M;


Chris Fields wrote:
> Sure, you are more than welcome to add this.  Our main source code repository in now on github (so one can fork the code, hack away, and submit pull requests), but we also accept patches.  
> 
> I suggest, though, for long-term maintenance you could be added as a collaborator.  
> 
> chris
> 
> On Nov 3, 2010, at 8:51 AM, Miguel Pignatelli wrote:
> 
>> Hi all,
>>
>> I have seen in the Nextgen section of the bioperl wiki (http://www.bioperl.org/wiki/Nextgen_in_Bioperl) that SFF support is in the wish list. I have some code written for parsing SFF files that I can refactor and contribute with it.
>>
>> Does anyone already took this?
>>
>> Best regards,
>>
>> M;
>>
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> 
> 
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