[Bioperl-l] BPbl2seq

[David Martin]

I am having some trouble with BPbl2seq. It doesn't want to read an empty
alignment and dies nastily, killing my script. Now, in principle the
analysis I am doing shouldn't give empty (ie non matching) results, but in
practice it does.

Any clues on how I can get the parser to not choke but be able to be
queried to see whether it has found a match in the output or not?

I don't want to have to keep restarting the script as I have about 75K
comparisons to run through.

..d



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David Martin PhD
Bioinformatics Scientific Officer
Wellcome Trust Biocentre, Dundee
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