[Bioperl-l] No text blast output; strip_html output non-parseable.

Ewan Birney birney@ebi.ac.uk
Tue, 11 Dec 2001 08:59:35 +0000 (GMT)


On Mon, 10 Dec 2001, Vsevolod Ilyushchenko wrote:

> Who said anything about being parasitic on NCBI servers??? :) We have an
> in-house blast server, but I want to use it as an application server from
> other machines.

Then it is easy - ship the raw file over http rather than the html'ised
file and store that.


> 
> Simon
> 
> Ewan Birney wrote:
> > 
> > The best approach is to run BLAST in house and use BPLite to parse the
> > output files.
> > 
> > Being parasitic on the NCBI servers is just that - being parasitic ;)
> 
> -- 
> Simon (Vsevolod ILyushchenko)   simonf@cshl.edu   
> http://www.simonf.com          simonf@simonf.com 
> 
> "A man who feels himself a citizen of the world whose 
> loyalty is to the human race and to life, rather than 
> to any exclusive part of it; a man who loves his country 
> because he loves mankind, and whose judgement is not 
> warped by tribal loyalties." Erich Fromm
> 

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