[Biojava-dev] Cloning repositories in eclipse

LAW Andy andy.law at roslin.ed.ac.uk
Thu Apr 11 08:01:44 UTC 2013


Remind me again of the reason for moving to git?

:o}


On 11 Apr 2013, at 01:54, Andreas Prlic <andreas at sdsc.edu> wrote:

>> I don't get why we have or need the release branch. Other projects hosted
>> on Github don't do it like that, and in my day job, we use maven and Git
>> with the release plugin without such a branch too.
>> 
> 
> 
> So the release plugin then tags the code, but does not create a branch? (in
> SVN tags and branches are essentially the same thing)  We could have one
> branch per release, but it sounds like this is not necessary. Also, looking
> back at past releases I can't remember that there was ever a commit on a
> release branch.
> 
> Andreas
> 
> 
> 
>> 
>> It makes pull requests a bit complicated too, as the web UI defaults to
>> the release branch. I had to force push something to my forked release
>> branch because I accidentally added a file to the wrong branch at first.
>> 
>> The single release branch also won't allow fix releases for older
>> releases, or am I wrong?
>> 
>> Hannes
>> 
>> Am Donnerstag, 11. April 2013 schrieb Andreas Prlic :
>> 
>> Same here, I got my eclipse setup to work with egit, but I thought that it
>>> was not as easy as I would have hoped.   Let's try to keep the entry
>>> barrier as low as possible.
>>> 
>>> This leaves the question: should we rename the devel or release branch to
>>> master? I'd say devel, since by default this would give you the latest
>>> code
>>> (similar to trunk checkouts in svn)
>>> 
>>> Andreas
>>> 
>>> 
>>> 
>>> On Wed, Apr 10, 2013 at 4:08 PM, Steve Darnell <darnells at dnastar.com>
>>> wrote:
>>> 
>>>> Eclipse user here. +1 for making BioJava easier to setup in Eclipse.
>>>> 
>>>> ~Steve
>>>> 
>>>> -----Original Message-----
>>>> From: biojava-dev-bounces at lists.open-bio.org [mailto:
>>>> biojava-dev-bounces at lists.open-bio.org] On Behalf Of Spencer Bliven
>>>> Sent: Wednesday, April 10, 2013 5:57 PM
>>>> To: biojava-dev
>>>> Subject: [Biojava-dev] Cloning repositories in eclipse
>>>> 
>>>> When I first drafted the instructions for cloning biojava in eclipse<
>>>> http://biojava.org/wiki/BioJava3_eclipse>,
>>>> I was frustrated that the simple 'Checkout Maven projects from SCM'
>>>> doesn't work with our layout. The alternate checkout method is about 4
>>>> times as long and much less intuitive.
>>>> 
>>>> I had some time to debug the problem today, and it seems that the
>>> e2m-egit
>>>> connector doesn't handle branches. It fails with a misleading message on
>>>> any repository without a master branch. I've submitted a bug report, but
>>>> I'm not optimistic about it getting patched quickly.
>>>> 
>>>> What proportion of BioJava users are using eclipse? Would fixing this be
>>>> worth renaming one of the branches to master?
>>>> 
>>>> -Spencer
>>>> _______________________________________________
>>>> biojava-dev mailing list
>>>> biojava-dev at lists.open-bio.org
>>>> http://lists.open-bio.org/mailman/listinfo/biojava-dev
>>>> 
>>>> _______________________________________________
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>>> 
>>> 
>>> 
>>> --
>>> -----------------------------------------------------------------------
>>> Dr. Andreas Prlic
>>> Senior Scientist, RCSB PDB Protein Data Bank
>>> University of California, San Diego
>>> (+1) 858.246.0526
>>> -----------------------------------------------------------------------
>>> _______________________________________________
>>> biojava-dev mailing list
>>> biojava-dev at lists.open-bio.org
>>> http://lists.open-bio.org/mailman/listinfo/biojava-dev
>>> 
>> 
> 
> 
> -- 
> -----------------------------------------------------------------------
> Dr. Andreas Prlic
> Senior Scientist, RCSB PDB Protein Data Bank
> University of California, San Diego
> (+1) 858.246.0526
> -----------------------------------------------------------------------
> _______________________________________________
> biojava-dev mailing list
> biojava-dev at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/biojava-dev

Later,

Andy
--------
Yada, yada, yada...

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