[Biojava-dev] BLAST(N) version 2.2.6 not supported

Alistair Chalk (CGB) alistair.chalk at cgb.ki.se
Fri Jan 30 04:30:06 EST 2004


Hi,

When will blast version 2.26 be supported by the BlastLikeSAXParser?

Error whch parsing a BLASTN 2.2.6 file gives:

Program ncbi-blastn Version 2.2.6 is not supported by the biojava blast-like
parsing framework
        at
org.biojava.bio.program.sax.BlastLikeSAXParser.interpret(BlastLikeSAXParser.
java:241)
        at
org.biojava.bio.program.sax.BlastLikeSAXParser.parse(BlastLikeSAXParser.java
:160

I'm making an effort to use biojava, but it isn't always easy :)

/Alistair

**********************************************
Ph.D. Student
Sonnhammer group
Center for Genomics and Bioinformatics
Karolinska Institute
Tel: +46 8 5248 6372
**********************************************






>>> FREE spam killer: http://eliminatespam.com * FREE PopUp Buster+:
http://popupbuster.net * FREE e-mail: http://riskfreemail.com




More information about the biojava-dev mailing list