[Biojava-dev] blast parsing

[Matthew Pocock]

Hi,

Is the NCBI's megablast format that you get from using
the NCBI's web form text output supported by our blast
parser? It seems to barf for me:

Exception in thread "main" org.xml.sax.SAXException:
Failed to parse query sequence ID
        at
org.biojava.bio.program.ssbind.HeaderStAXHandler$BlastDBQueryStAXHandler.setStringValue(HeaderStAXHandler.java:138)
...

Matthew


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