[Open-bio-l] [EMBOSS] Common Sample Data Collection, was: SCF files (Staden)

[Fields, Christopher J]

That might be the best source to pull from.  Does it archive old file examples (such as older SwissProt/GenBank/EMBL)?

chris

On Nov 30, 2011, at 8:49 AM, Peter Cock wrote:

> I just checked with Jon and he was happy to forward this back to
> the list, and also added a couple of URLs that I'd asked about:
> 
> http://bioportal.bioontology.org/ontologies/44600
> http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=EDAM
> 
> Peter
> 
> On Wed, Nov 30, 2011 at 11:14 AM, Jon Ison <jison at ebi.ac.uk> wrote:
>> Hi Peter (and Peter)
>> 
>> Just a quick note to say that all (well, nearly all) common bioinformatics data formats are
>> catalogued in the EDAM ontology:
>> 
>> http://sourceforge.net/projects/edamontology/files
>> http://edamontology.sourceforge.net/
>> 
>> OK - there's bound to be some we've missed :)
>> 
>> Anyhow, I thought it might help to structure any effort to document data formats (an effort which
>> I wholeheartedly approve of by the way).  One thing I'd like to add to the EDAM "format"
>> definitions is a link to the format specification, or failing that, an example.
>> 
>> Cheers both
>> 
>> Jon
>> 
> 
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