[Open-bio-l] genotype database

[Cook, Malcolm]

I don't know if they read this forum, but, you might first take a look at

http://www.mucosa.de/eng/

see if MFG Tools meets your needs,

and offer to collab with them if there are extensions that you'd like to make...


Just a thought....

Regards,

______________________________
Malcolm Cook - Database Applications Manager
Stowers Institute for Medical Research
Bioinformatics Group
1000 E 50th Street
Kansas City, MO 64110
tel: 816-926-4449
fax: 816-926-2098
cell: 816-668-9792

 -----Original Message-----
From: 	open-bio-l-admin@open-bio.org [mailto:open-bio-l-admin@open-bio.org]  On Behalf Of jmuilu@pp.nic.fi
Sent:	Thursday, December 05, 2002 12:22 AM
To:	open-bio-l@open-bio.org
Cc:	mummi@cshl.org
Subject:	[Open-bio-l] genotype database



Hi All,
We are developing a genotype/phenotype databases for a large  EU-wide twin
study.  Genotyping will be done centrally in three different labs in Finland
and Sweden and the data will be stored at national labs so that each lab has
only their own slice of data with phenotype info. A goal is to provide open
source database and tools for the labs which have various levels of IT
expertices. Common database structures would also make joint meta studies
easier over the whole data sets.

I wonder is somebody interested in collaborating with this at the good bio*
community. Has already similar work done before? OBDA looks like a interesting
framework to integrate with. Any comments on this? First *draft* of database
schema is  available at:
http://www.genome.helsinki.fi/EU-TWIN/database/gtdb/database.html

Best Regards, Juha
--
Juha Muilu, PhD                   
Biomedicum                        
P.O. Box 63  Haartmaninkatu 8 
00014 Helsinki Finland
juha.muilu@helsinki.fi




________________________________________________________________
Ilmainen Internet @ http://www.nic.fi/

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