[Open-bio-l] RE: Schema for genes & features & mappings to assemblies

Hilmar Lapp hlapp@gnf.org
Wed, 24 Apr 2002 08:49:12 -0700


> -----Original Message-----
> From: Ewan Birney [mailto:birney@ebi.ac.uk]
> Sent: Wednesday, April 24, 2002 1:20 AM
> To: Hilmar Lapp
> Cc: Lincoln Stein; Elia Stupka; Thomas Down; GMOD Devel (E-mail); OBDA
> BioSQL (E-mail); Craig Melsopp
> Subject: RE: Schema for genes & features & mappings to assemblies
> 
[...] 
> 
> # semantics
> # analysis_id - internal id
> # created   - date to distinguish newer and older versions off the 
> #             same analysis. Not well maintained so far.
> # logic_name  string to identify the analysis. Used mainly 
> inside pipeline.
> # db, db_version, db_file
> #  - db should be a database name, db version the version of that db
> #    db_file the file system location of that database, 
> #    probably wiser to generate from just db and configurations

:) Haven't I read in biosql that DBs don't have versions but entries do?

Thanks for the DDL + comments.

	-hilmar