[MOBY-l] Local BioMOBY Central - Ontology test fails
Rajasekar Karthik
karthik085 at gmail.com
Sun Feb 11 22:18:25 UTC 2007
Hi,
I am setting up a local biomoby central. I am following this document:
http://biomoby.open-bio.org/CVS_CONTENT/moby-live/Docs/MOBY-S_API/InstallingLocalMOBYCentral.html
1. When I do, make test - all test cases passes for all the files, except
for Client-OntologyServer.t. I attached my test results for all('make test')
and for Client-OntologyServer.t('perl t/Client-OntologyServer.t') along this
mail. Here is just the summary:
Failed Test Stat Wstat Total Fail List of Failed
-------------------------------------------------------------------------------
t/Client-OntologyServer.t 13 3328 27 13 9-17 19-22
1 test skipped.
Failed 1/13 test scripts. 13/381 subtests failed.
Files=13, Tests=381, 79 wallclock secs ( 7.82 cusr + 0.70 csys = 8.52 CPU)
Failed 1/13 test programs. 13/381 subtests failed.
make: *** [test_dynamic] Error 255
2. t/Config file is being skipped for testing. It says:
all skipped: Required only when you have your own local MOBY Central
How do I test t/Config?
Any help would be appreciated.
--
Best Regards,
Rajasekar Karthik
karthik085 at gmail.com
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PERL_DL_NONLAZY=1 /usr/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/Central.....................ok
t/Client-Central..............ok
t/Client-CollectionArticle....ok
t/Client-OntologyServer.......
# Failed test at t/Client-OntologyServer.t line 111.
# got: '0'
# expected: '1'
# Namespace 'Rub1' reported erroneously as non-existent.
# Failed test at t/Client-OntologyServer.t line 111.
# got: '0'
# expected: '1'
# Namespace 'Rub2' reported erroneously as non-existent.
# Failed test at t/Client-OntologyServer.t line 120.
# got: '0'
# expected: '1'
# Object 'Object' reported erroneously as non-existent.
# Failed test at t/Client-OntologyServer.t line 120.
# got: '0'
# expected: '1'
# Object 'String' reported erroneously as non-existent.
# Failed test at t/Client-OntologyServer.t line 120.
# got: '0'
# expected: '1'
# Object 'Integer' reported erroneously as non-existent.
# Failed test at t/Client-OntologyServer.t line 120.
# got: '0'
# expected: '1'
# Object 'Float' reported erroneously as non-existent.
# Failed test at t/Client-OntologyServer.t line 120.
# got: '0'
# expected: '1'
# Object 'DateTime' reported erroneously as non-existent.
# Failed test at t/Client-OntologyServer.t line 127.
# got: '0'
# expected: '1'
# Service type 'Rub1' reported erroneously as non-existent.
# Failed test at t/Client-OntologyServer.t line 127.
# got: '0'
# expected: '1'
# Service type 'Rub2' reported erroneously as non-existent.
# Failed test at t/Client-OntologyServer.t line 140.
# got: '0'
# expected: '1'
# Relationship 'ISA' reported erroneously as non-existent.
# Failed test at t/Client-OntologyServer.t line 140.
# got: '0'
# expected: '1'
# Relationship 'HASA' reported erroneously as non-existent.
# Failed test at t/Client-OntologyServer.t line 140.
# got: '0'
# expected: '1'
# Relationship 'HAS' reported erroneously as non-existent.
# Failed test at t/Client-OntologyServer.t line 146.
# got: '0'
# expected: '1'
# Relationship 'ISA' reported erroneously as non-existent.
# Looks like you failed 13 tests of 27.
dubious
Test returned status 13 (wstat 3328, 0xd00)
DIED. FAILED tests 9-17, 19-22
Failed 13/27 tests, 51.85% okay
t/Client-Registration.........ok
t/Client-SecondaryArticle.....ok
t/Client-Service..............ok
t/Client-ServiceInstance......ok
t/Client-SimpleArticle........ok
t/CommonSubs..................ok
t/Config......................skipped
all skipped: Required only when you have your own local MOBY Central
t/CrossReference..............ok
t/Template....................ok
Failed Test Stat Wstat Total Fail List of Failed
-------------------------------------------------------------------------------
t/Client-OntologyServer.t 13 3328 27 13 9-17 19-22
1 test skipped.
Failed 1/13 test scripts. 13/381 subtests failed.
Files=13, Tests=381, 77 wallclock secs ( 7.68 cusr + 0.70 csys = 8.38 CPU)
Failed 1/13 test programs. 13/381 subtests failed.
make: *** [test_dynamic] Error 255
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