[moby] Re: [MOBY-l] jMoby bug?

Mark Wilkinson mwilkinson at mrl.ubc.ca
Wed Feb 2 19:26:00 UTC 2005


On Wed, 2005-02-02 at 10:26, Paul Gordon wrote:

> I would be much more inclined to get the MOBY Central maintainers to 
> accept namespaces (especially since it used to) than to reduce the XML 
> to unqualified tags. Mark?

???  it should be even MORE accepting of XML namespaces now that we have
switched to XML::LibXML.

I'll pass this on to Eddie and see what he says.  If it is a problem
with the underlying C libxml2 libraries then we are in big trouble!

M

>
>In this case, the inputs part of the template service looked like
><Input>
><Simple xmlns="http://www.biomoby.org/moby">
><objectType>AminoAcidSequence</objectType>
><Namespace>NCBI_gi</Namespace>
></Simple></Input>
>
>If I change it to look like this
>
><Input>
><Simple>
><objectType>AminoAcidSequence</objectType>
><Namespace>NCBI_gi</Namespace>
></Simple></Input>
>
>then it works.
>
>So basically moby central doesn't like to see the xml namespace in
there
>any more, though I'm pretty sure this worked last summer.
>

-- 
Mark Wilkinson
Assistant Professor (Bioinformatics)
Dept. Medical Genetics, UBC, Canada




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