[MOBY-l] java xml parsing
Benjamin Good
bmg at sfu.ca
Tue May 25 10:55:46 UTC 2004
Say I have a Query response like this
"<?xml version='1.0' encoding='UTF-8'?>"+
"<moby:MOBY xmlns:moby='http://www.biomoby.org/moby'
xmlns='http://www.biomoby.org/moby'>"+
"<moby:mobyContent
moby:authority='illuminae.com'><moby:serviceNotes>This is provided by
SeqHound</moby:serviceNotes>"+
"<moby:mobyData moby:queryID='1'>"+
"<moby:Simple moby:articleName=''>" +
"<genbank-flatfile namespace='NCBI_gi'
id='111076'><![CDATA[LOCUS D31461 32 aa linear ROD 30-MAY-1997"+
"DEFINITION T-cell receptor delta chain BDN7, thymus - mouse
(fragment)."+
"ACCESSION D31461"+
"PID g111076"+
"ORIGIN"+
" 1 atyfcalmer vsrrgapdkl vfgqgtqvtv ep"+
"//]]></genbank-flatfile></moby:Simple>"+
"</moby:mobyData>"+
"</moby:mobyContent></moby:MOBY>";
Any suggestions regarding the best way to extract the gi id or the CDATA
? It seems there are many options, just wondering if the Java group has
already settled on an approach.
thanks
-Ben
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