[MOBY-l] A Java web service problem

Michael Gruenberger mgruenb at gmx.net
Thu Mar 4 10:36:22 UTC 2004


The CGI client output error message:

BioMOBY Service: getPBfromGO
consumes a Gene Ontology accession number and returns a collection of
associated Pathbase accession numbers. 
________________________________________________________________________
Result for GO:0005224
Service returned no response

===================================================================

scripts/debugYourService www.pathbase.net getPBfromGO scripts/goid.moby:

It just outputs the Base64 encoded message again. It doesn't decode it.
No error message as far as I can see. Here the relevant part of the
output (with the Base64 stuff cut short):


...
Date: Thu, 04 Mar 2004 10:29:32 GMT
Server: Apache Coyote/1.0
Content-Type: text/xml; charset=utf-8
Client-Date: Thu, 04 Mar 2004 10:29:14 GMT
Client-Response-Num: 1
Client-Transfer-Encoding: chunked
Set-Cookie: JSESSIONID=47867777393E99565BDE4F04BFBF9585; Path=/axis

<?xml version="1.0" encoding="UTF-8"?>
<soapenv:Envelope
xmlns:soapenv="http://schemas.xmlsoap.org/soap/envelope/"
xmlns:xsd="http://www.w3.org/1999/XMLSchema"
xmlns:xsi="http://www.w3.org/1999/XMLSchema-instance">
 <soapenv:Body>
  <ns1:getPBfromGOResponse
soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/"
xmlns:ns1="http://biomoby.org/">
   <ns1:getPBfromGOReturn xsi:type="ns2:base64Binary"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xmlns:ns2="http://www.w3.org/2001/XMLSchema">ck8wQUJYUUNORHc[cut]...[cut]JQ0FnUEM5dGIySjVPazFQUWxrKwpDZz09</ns1:getPBfromGOReturn>
  </ns1:getPBfromGOResponse>
 </soapenv:Body>
</soapenv:Envelope>
SOAP::Deserializer::deserialize: ()
SOAP::Parser::decode: ()
SOAP::SOM::new: ()
rO0ABX[cut]...[cut]C9tb2J5Ok1PQlk+
Cg==SOAP::Data::DESTROY: ()
SOAP::Data::DESTROY: ()
....


On Thu, 2004-03-04 at 10:05, Martin Senger wrote:
> > still doesn't decode it and Marks CGI client still gives the same error
> > message.
> >
>    What does the error message say?
>  
>    Martin




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