Attn. Ken - Re: [MOBY] [MOBY-l] Continuing problems invoking Moby Services

Mon Oct 20 09:23:25 EDT 2003

Hey Ken, 

Is it possible that this solves the problem you were having with
CommonSubs as well?

M

On Mon, 2003-10-20 at 08:21, Mark Wilkinson wrote:
> My fault.  It's fixed now.
> 
> Sorry about that!
> 
> M
> 
> On Mon, 2003-10-20 at 07:09, Jay Potts wrote:
> > Hey Folks,
> > I'm still having some trouble invoking Moby Services using Java.
> > 
> > Could someone who is familiar with the GetGoTerm service, please take a look
> > at this and let me know if I'm simply sending bad data to that service?
> > 
> > I'm using the Call method of the Java Api, after setting up a new endpoint
> > and URI to point to the service I want.
> > 
> > This is the message I'm sending as the payload of the SOAP message:
> > <?xml version="1.0" encoding="UTF-8"?>
> > <soapenv:Envelope xmlns:soapenv="http://schemas.xmlsoap.org/soap/envelope/"
> > xmlns:xsd="http://www.w3.org/2001/XMLSchema"
> > xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
> >  <soapenv:Body>
> >   <namesp3:getGoTerm xmlns:namesp3="http://biomoby.org/">
> >   <body>
> >    <![CDATA[<?xml version='1.0' encoding='UTF-8'?>
> > <moby:MOBY xmlns:moby="http://www.biomoby.org/moby">
> > 	<moby:Query>
> > 		<moby:queryInput moby:articleName="ccc">
> > 			<moby:Simple>
> > 				<moby:Object moby:namespace="GO" moby:id="GO:0008303" />
> > 			</moby:Simple>
> > 		</moby:queryInput>
> > 	</moby:Query>
> > </moby:MOBY>]]>
> >   </body>
> >     </namesp3:getGoTerm>
> >  </soapenv:Body>
> > </soapenv:Envelope>
> > 
> > 
> > Now, when I send that message, I get this response:
> > <?xml version='1.0' encoding='UTF-8'?>
> >       <moby:MOBY xmlns:moby='http://www.biomoby.org/moby'>
> >         <moby:Response moby:authority='http://www.illuminae.com'>
> > 
> >     </moby:Response>
> >       </moby:MOBY>
> > 
> > 
> > So, thinking that perhaps I was giving it too much, I then tried sending
> > just the body of that message, which is the following:
> > <?xml version='1.0' encoding='UTF-8'?>
> > <moby:MOBY xmlns:moby="http://www.biomoby.org/moby">
> > 	<moby:Query>
> > 		<moby:queryInput moby:articleName="ccc">
> > 			<moby:Simple>
> > 				<moby:Object moby:namespace="GO" moby:id="GO:0008303" />
> > 			</moby:Simple>
> > 		</moby:queryInput>
> > 	</moby:Query>
> > </moby:MOBY>
> > 
> > 
> > And the response is then somewhat different:
> > <?xml version='1.0' encoding='UTF-8'?>
> >       <moby:MOBY xmlns:moby='http://www.biomoby.org/moby'>
> >         <moby:Response moby:authority='http://www.illuminae.com'>
> > 
> >         <moby:queryResponse/>
> > 
> >         <moby:queryResponse/>
> > 
> >     </moby:Response>
> >       </moby:MOBY>
> > 
> > 
> > Its still apparently empty, but it's got those two queryResponse lines in
> > there.
> > 
> > So, I have a few questions:
> > 1) Which is correct for setting as the payload? Should I set the top
> > message, that is a whole soap message, or should I send the bottom, which is
> > just the xml document containing the argument? Keep in mind I'm using the
> > Java API's call method, and passing the message as the payload (which one I
> > should pass, I'm not sure).
> > 2) Does anyone who is actually familiar with the GetGoTerm service, know if
> > I'm actually calling it correctly? I have a feeling that I'm not giving it
> > what it wants, which is why it's just giving me empty messages back.
> > 3) Does the articleName attribute of the queryInput matter? I have it set as
> > ccc for no reason, mainly because I saw it in messages that other people
> > posted up. I think this is supposed to be the name of a named input, right?
> > If that's the case, where do I find out what this name is supposed to be?
> > Will it break it if it's not named correctly?
> > 
> > 
> > 
> > _______________________________________________
> > moby-l mailing list
> > moby-l at biomoby.org
> > http://biomoby.org/mailman/listinfo/moby-l
-- 
Mark Wilkinson <markw at illuminae.com>
Illuminae