[MOBY-guts] biomoby commit

Dmitry Repchevski drepchevski at dev.open-bio.org
Sun Dec 20 16:28:54 UTC 2009


drepchevski
Sun Dec 20 11:28:54 EST 2009
Update of /home/repository/moby/moby-live/Java/xmls
In directory dev.open-bio.org:/tmp/cvs-serv31355/xmls

Modified Files:
	inbMoby.xml 
Log Message:

moby-live/Java/xmls inbMoby.xml,1.8,1.9
===================================================================
RCS file: /home/repository/moby/moby-live/Java/xmls/inbMoby.xml,v
retrieving revision 1.8
retrieving revision 1.9
diff -u -r1.8 -r1.9
--- /home/repository/moby/moby-live/Java/xmls/inbMoby.xml	2009/12/17 17:21:05	1.8
+++ /home/repository/moby/moby-live/Java/xmls/inbMoby.xml	2009/12/20 16:28:54	1.9
@@ -16,6 +16,8 @@
 <property name="inb.central.model.jar" value="MobyCentralModel.jar"/>
 <property name="inb.central.gui.jar" value="MobyGUIComponents.jar"/>
 <property name="inb.generator.jar" value="MobyGenerator.jar"/>
+<property name="inb.ontology.jar" value="datatypes.jar"/>
+<property name="inb.visualizers.jar" value="MobyComponents.jar"/>
 
 <!-- ================================================================== -->
 <!-- Initialize (whatever needs to be done)                             -->
@@ -39,7 +41,7 @@
 <!-- ================================================================== -->
 <!-- Build INB MobyCoreService                                          -->
 <!-- ================================================================== -->
-<target name="build-core-service" depends="build-core, inb-core-service-compile"
+<target name="build-core-service" depends="inb-core-service-compile"
   description="Build MobyCoreService">
   <property name="released.date" value="${TODAY_SHORT}"/>
   <jar destfile="${build.lib}/${inb.core.service.jar}">
@@ -54,7 +56,7 @@
 <!-- ================================================================== -->
 <!-- Build INB MobyCentral                                              -->
 <!-- ================================================================== -->
-<target name="build-central" depends="build-core, inb-central-compile"
+<target name="build-central" depends="inb-central-compile"
   description="Build MobyCentral">
   <property name="released.date" value="${TODAY_SHORT}"/>
   <jar destfile="${build.lib}/${inb.central.jar}">
@@ -70,7 +72,7 @@
 <!-- ================================================================== -->
 <!-- Build INB MobyCentralModel                                              -->
 <!-- ================================================================== -->
-<target name="build-central-model" depends="build-central, inb-central-model-compile"
+<target name="build-central-model" depends="inb-central-model-compile"
   description="Build MobyCentralModel">
 
   <property name="released.date" value="${TODAY_SHORT}"/>
@@ -87,7 +89,7 @@
 <!-- ================================================================== -->
 <!-- Build INB MobyGUIComponents                                        -->
 <!-- ================================================================== -->
-<target name="build-central-gui" depends="build-central-model, inb-central-gui-compile"
+<target name="build-central-gui" depends="inb-central-gui-compile"
   description="Build MobyGUIComponents">
 
   <property name="released.date" value="${TODAY_SHORT}"/>
@@ -104,7 +106,7 @@
 <!-- ================================================================== -->
 <!-- Build INB MobyGenerator                                            -->
 <!-- ================================================================== -->
-<target name="build-generator" depends="build-central-gui, inb-generator-compile"
+<target name="build-generator" depends="inb-generator-compile"
   description="Build MobyGenerator">
 
   <property name="released.date" value="${TODAY_SHORT}"/>
@@ -120,6 +122,39 @@
   </jar>
 </target>
 
+<!-- ================================================================== -->
+<!-- Build INB Ontology Datatypes                                       -->
+<!-- ================================================================== -->
+<target name="build-ontology" depends="inb-datatypes-ontology-compile"
+  description="Build MobyComponents">
+
+  <property name="released.date" value="${TODAY_SHORT}"/>
+  <jar destfile="${build.lib}/${inb.ontology.jar}">
+    <manifest>
+      <attribute name="Built-By"      value="${user.name}"/>
+      <attribute name="Released-Date" value="${released.date}"/>
+    </manifest>
+    <fileset dir="${inb.config.dir}/ontology"/>
+    <fileset dir="${build.inb.ontology}"/>
+  </jar>
+</target>
+
+<!-- ================================================================== -->
+<!-- Build INB Ontology Visual Components                               -->
+<!-- ================================================================== -->
+<target name="build-ontology-components" depends="inb-visualizer-components-compile"
+  description="Build MobyComponents">
+
+  <property name="released.date" value="${TODAY_SHORT}"/>
+  <jar destfile="${build.lib}/${inb.visualizers.jar}">
+    <manifest>
+      <attribute name="Built-By"      value="${user.name}"/>
+      <attribute name="Released-Date" value="${released.date}"/>
+    </manifest>
+    <fileset dir="${build.inb.visualizers}"/>
+  </jar>
+</target>
+
   <!-- ================================================================== -->
   <!-- Compiles inb core source                                           -->
   <!-- ================================================================== -->
@@ -149,7 +184,7 @@
   <!-- ================================================================== -->
   <!-- Compiles inb central source                                        -->
   <!-- ================================================================== -->
-  <target name="inb-central-compile" depends="inb-init"
+  <target name="inb-central-compile" depends="build-core"
     description="Compile all inb central source code">
 
     <condition property="xlint.param" value="-Xlint:unchecked" else="-Xlint:none">
@@ -177,9 +212,9 @@
   </target>
 
   <!-- ================================================================== -->
-  <!-- Compiles inb central model source                                        -->
+  <!-- Compiles inb central model source                                  -->
   <!-- ================================================================== -->
-  <target name="inb-central-model-compile" depends="inb-init"
+  <target name="inb-central-model-compile" depends="build-central"
     description="Compile all inb central model source code">
 
     <condition property="xlint.param" value="-Xlint:unchecked" else="-Xlint:none">
@@ -209,7 +244,7 @@
   <!-- ================================================================== -->
   <!-- Compiles inb central model source                                        -->
   <!-- ================================================================== -->
-  <target name="inb-central-gui-compile" depends="inb-init"
+  <target name="inb-central-gui-compile" depends="build-central-model"
     description="Compile all inb central gui components source code">
 
     <condition property="xlint.param" value="-Xlint:unchecked" else="-Xlint:none">
@@ -220,7 +255,7 @@
       sourcepath=""
       srcdir="${src.main}"
       destdir="${build.inb.model.gui}"
-      classpath="${build.lib}/${inb.core.jar};${build.lib}/${inb.central.jar};;${build.lib}/${inb.central.model.jar};"
+      classpath="${build.lib}/${inb.core.jar};${build.lib}/${inb.central.jar};${build.lib}/${inb.central.model.jar}"
       verbose="${compile.verbose}"
       debug="${compile.debug}"
       debuglevel="lines,vars,source"
@@ -239,7 +274,7 @@
   <!-- ================================================================== -->
   <!-- Compiles inb generator utility source                              -->
   <!-- ================================================================== -->
-  <target name="inb-generator-compile" depends="inb-init"
+  <target name="inb-generator-compile" depends="build-central-gui"
     description="Compile generator applet source code">
 
     <condition property="xlint.param" value="-Xlint:unchecked" else="-Xlint:none">
@@ -267,9 +302,9 @@
   </target>
 
   <!-- ================================================================== -->
-  <!-- Compiles inb core server source                                    -->
+  <!-- Compiles inb core service source                                    -->
   <!-- ================================================================== -->
-  <target name="inb-core-service-compile" depends="inb-init"
+  <target name="inb-core-service-compile" depends="build-core"
     description="Compile core service source code">
 
     <condition property="xlint.param" value="-Xlint:unchecked" else="-Xlint:none">
@@ -294,4 +329,67 @@
       
       <compilerarg value="${xlint.param}"/>
     </javac>
+
+  </target>
+
+  <!-- ================================================================== -->
+  <!-- Compiles inb visualizer components source                          -->
+  <!-- ================================================================== -->
+  <target name="inb-visualizer-components-compile" depends="build-ontology"
+    description="Compile swing visualizer components source code">
+
+    <condition property="xlint.param" value="-Xlint:unchecked" else="-Xlint:none">
+      <istrue value="${compile.warnings}"/>
+    </condition>
+
+    <javac
+      sourcepath=""
+      srcdir="${src.main}"
+      destdir="${build.inb.visualizers}"
+      classpath="${build.lib}/${inb.core.jar};${build.lib}/${inb.ontology.jar}"
+      verbose="${compile.verbose}"
+      debug="${compile.debug}"
+      debuglevel="lines,vars,source"
+      deprecation="${compile.deprecation}"
+      optimize="${compile.optimize}"
+      includes="org/inb/biomoby/client/gui/*,org/inb/biomoby/client/gui/swing/*,org/inb/biomoby/client/gui/swing/border/*,org/inb/biomoby/client/gui/auxiliary/*,org/inb/biomoby/client/gui/ontology/*"
+      >
+      
+      <classpath refid="build.classpath"/>
+      <classpath refid="dependency.classpath"/>
+      
+      <compilerarg value="${xlint.param}"/>
+    </javac>
+
+  </target>
+
+  <!-- ================================================================== -->
+  <!-- Compiles inb datatypes ontology objects source                     -->
+  <!-- =======	=========================================================== -->
+  <target name="inb-datatypes-ontology-compile" depends="build-core"
+    description="Compile generated ontology datatype classes source code">
+
+    <condition property="xlint.param" value="-Xlint:unchecked" else="-Xlint:none">
+      <istrue value="${compile.warnings}"/>
+    </condition>
+
+    <javac
+      sourcepath=""
+      srcdir="${src.main}"
+      destdir="${build.inb.ontology}"
+      classpath="${build.lib}/${inb.core.jar}"
+      verbose="${compile.verbose}"
+      debug="${compile.debug}"
+      debuglevel="lines,vars,source"
+      deprecation="${compile.deprecation}"
+      optimize="${compile.optimize}"
+      includes="org/inb/biomoby/shared/ontology/*"
+      >
+      
+      <classpath refid="build.classpath"/>
+      <classpath refid="dependency.classpath"/>
+      
+      <compilerarg value="${xlint.param}"/>
+    </javac>
+
   </target>




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