[MOBY-guts] biomoby commit

[Paul Gordon]

gordonp
Fri Nov 14 15:32:02 EST 2008
Update of /home/repository/moby/moby-live/Java/src/main/org/biomoby/client
In directory dev.open-bio.org:/tmp/cvs-serv8312/src/main/org/biomoby/client

Modified Files:
	MobyRequest.java 
Log Message:
Added convenience method for secondaries, javadocs
moby-live/Java/src/main/org/biomoby/client MobyRequest.java,1.39,1.40
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/client/MobyRequest.java,v
retrieving revision 1.39
retrieving revision 1.40
diff -u -r1.39 -r1.40
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/client/MobyRequest.java	2008/10/30 02:33:25	1.39
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/client/MobyRequest.java	2008/11/14 20:32:02	1.40
@@ -224,6 +224,13 @@
     public MobyContentInstance getInput(){
 	return inputData;
     }
+    
+    /**
+     *  Same functionality as setSecondaryInput(MobyDataSecondaryInstance[])
+     */
+    public void setSecondaryInput(Collection<MobyDataSecondaryInstance> secondaryData) throws MobyException{
+	setSecondaryInput(secondaryData.toArray(new MobyDataSecondaryInstance[secondaryData.size()]));
+    }
 
     /**
      * This method will assign the provided secondary parameters to all primary input data currently
@@ -274,7 +281,8 @@
      * are properly defined according to the Web service definition,
      * a SOAP request will be sent to the remote server, and the method 
      * will return one or more MOBY objects (synchronous).  
-     * Call this method after calling setService, and setInput.
+     * Call this method after calling setService, and setInput.  If you do not call
+     * setSecondaryInput, the default secondary parameter values will be used.
      *
      * @return the results of the remote Web service in response to the give input
      *