[MOBY-guts] biomoby commit

[Eddie Kawas]

kawas
Thu May 29 10:19:47 EDT 2008
Update of /home/repository/moby/moby-live/Perl/MOBY-Server
In directory dev.open-bio.org:/tmp/cvs-serv15744/Perl/MOBY-Server

Modified Files:
	Changes 
Log Message:
updating the changes to reflect recent commits
moby-live/Perl/MOBY-Server Changes,1.5,1.6
===================================================================
RCS file: /home/repository/moby/moby-live/Perl/MOBY-Server/Changes,v
retrieving revision 1.5
retrieving revision 1.6
diff -u -r1.5 -r1.6
--- /home/repository/moby/moby-live/Perl/MOBY-Server/Changes	2008/05/12 15:08:10	1.5
+++ /home/repository/moby/moby-live/Perl/MOBY-Server/Changes	2008/05/29 14:19:47	1.6
@@ -1,5 +1,37 @@
 Revision history for Perl extension MOBY.
 
+1.05
+
+	- Multiple bug fixes / additions to installer (thanks to Jason Stewart),
+	  as follows: 
+		Additions
+		* detecting root and giving a warning if not root
+		* creating apache file in conf.d/ if running apache2
+		* added apache defaults for debian/ubuntu systems
+		* added a couple longer messages to give people a heads up
+		  what is happening.
+		* changed many/most of the do {...} if pprompt() to 
+		  if (prompt()) {...}
+		* changed the big multi-line messages from multiple 
+		  say "..." to say <<EOT;
+		* re-indented most of the file - the whitespace was messed 
+		  up on Emacs22.
+
+
+		bug fixes
+		* the prompt menu for cloning the DB has a default of 'b' 
+		  in the prompt string, but no default in the actual call to
+		  prompt() so if the user didn't type anything they got an 
+		  ugly error
+		* in prompt_for_directory() switched the cases around for -e
+		  and -w otherwise -e wouldn't get triggered
+		* in config_file_from_template()  added an if defined $fh test
+		* added a chmod 600 to the mobycentral.config because it has
+		  the DB root password
+		* called die() if mysql wasn't detected
+	- fixed a bug in the service_tester.pl script that referenced $opt_c
+	  instead of $url. (thanks to Jason Stewart)
+
 1.04
 	- fixed bug in MOBY::Client::Central::DUMP that resulted
 	  in an error ('Not an ARRAY reference at