[MOBY-guts] biomoby commit

Paul Gordon gordonp at dev.open-bio.org
Sat Jan 26 17:53:55 UTC 2008


gordonp
Sat Jan 26 12:53:55 EST 2008
Update of /home/repository/moby/moby-live/Java/xmls
In directory dev.open-bio.org:/tmp/cvs-serv21226/xmls

Modified Files:
	libraries.xml 
Log Message:
Added JAX-WS and full JODConverter dependencies
moby-live/Java/xmls libraries.xml,1.17,1.18
===================================================================
RCS file: /home/repository/moby/moby-live/Java/xmls/libraries.xml,v
retrieving revision 1.17
retrieving revision 1.18
diff -u -r1.17 -r1.18
--- /home/repository/moby/moby-live/Java/xmls/libraries.xml	2007/12/06 20:23:49	1.17
+++ /home/repository/moby/moby-live/Java/xmls/libraries.xml	2008/01/26 17:53:55	1.18
@@ -21,7 +21,7 @@
 <property name="commons-logging"   value="commons-logging-1.0.4.jar"/>
 <property name="commons-httpclient" value="commons-httpclient-3.0-rc2.jar"/>
 <property name="commons-codec"     value="commons-codec-1.3.jar"/>
-<property name="commons-io"        value="commons-io-1.0.jar"/>
+<property name="commons-io"        value="commons-io-1.3.1.jar"/>
 <property name="commons-lang"      value="commons-lang-2.1.jar"/>
 <property name="jaxrpc"            value="jaxrpc.jar"/>
 <property name="wsdl4j"            value="wsdl4j-1.5.1.jar"/>
@@ -35,7 +35,6 @@
 <property name="taverna"           value="taverna.jar"/>
 <property name="lsid-server"       value="lsid-server-1.1.2.jar"/>
 <property name="lsid-client"       value="lsid-client-1.1.2.jar"/>
-<property name="jodconverter"     value="jodconverter-2.2.0.jar"/>
 <property name="castor"		       value="castor-0.9.5.jar"/>
 <property name="dns-java"    	   value="dnsjava-1.3.2.jar"/>
 
@@ -58,7 +57,36 @@
 <property name="commons-collection"     value="commons-collections-2.1.jar"/>
 <property name="commons-pool"     value="commons-pool-1.1.jar"/>
 <property name="commons-dbcp"     value="commons-dbcp-1.1.jar"/>
-   
+<!-- Begin JAX-WS JARs, Paul Gordon -->
+<property name="FastInfoset"      value="FastInfoset.jar"/>
+<property name="http"             value="http.jar"/>
+<property name="jaxb-api"         value="jaxb-api.jar"/>
+<property name="jaxb-impl"        value="jaxb-impl.jar"/>
+<property name="jaxb-xjc"         value="jaxb-xjc.jar"/>
+<property name="jaxws-api"        value="jaxws-api.jar"/>
+<property name="jaxws-rt"         value="jaxws-rt.jar"/>
+<property name="jaxws-tools"      value="jaxws-tools.jar"/>
+<property name="jsr173_api"       value="jsr173_api.jar"/>   
+<property name="jsr181-api"       value="jsr181-api.jar"/>   
+<property name="jsr250-api"       value="jsr250-api.jar"/>   
+<property name="resolver"         value="resolver.jar"/>
+<property name="saaj-api"         value="saaj-api.jar"/>
+<property name="saaj-impl"        value="saaj-impl.jar"/>
+<property name="sjsxp"            value="sjsxp.jar"/>
+<property name="stax-ex"          value="stax-ex.jar"/>
+<property name="streambuffer"     value="streambuffer.jar"/>
+<!--End JAX-WS JARs -->
+<!-- Begin JODConverter JARs, Paul Gordon -->
+<property name="jodconverter"     value="jodconverter-2.2.1.jar"/>
+<property name="juh"              value="juh-2.3.0.jar"/>
+<property name="jurt"             value="jurt-2.3.0.jar"/>
+<property name="ridl"             value="ridl-2.3.0.jar"/>
+<property name="slf4j"            value="slf4j-api-1.4.3.jar"/>
+<property name="slf4j-impl"       value="slf4j-jdk14-1.4.3.jar"/>
+<property name="unoil"            value="unoil-2.3.0.jar"/>
+<!--End JODConverter JARs -->
+
+
 <!-- Check that all third-parties libraries have been fetched -->
 <condition property="libs.present">
   <and> 
@@ -76,8 +104,6 @@
   <available file="${lib.dir}/${commons-collection}"/>
   <available file="${lib.dir}/${commons-dbcp}"/>
 
-<available file="${lib.dir}/${jodconverter}"/> 
- 
   <available file="${lib.dir}/${castor}"/>
   <available file="${lib.dir}/${dns-java}"/>
   
@@ -114,6 +140,31 @@
   <available file="${lib.dir}/${jcalendar}"/>
   <available file="${lib.dir}/${icis-pedigree}"/>
 
+<available file="${lib.dir}/${FastInfoset}"/>
+<available file="${lib.dir}/${http}"/>
+<available file="${lib.dir}/${jaxb-api}"/>
+<available file="${lib.dir}/${jaxb-impl}"/>
+<available file="${lib.dir}/${jaxb-xjc}"/>
+<available file="${lib.dir}/${jaxws-api}"/>
+<available file="${lib.dir}/${jaxws-rt}"/>
+<available file="${lib.dir}/${jaxws-tools}"/>
+<available file="${lib.dir}/${jsr173_api}"/>
+<available file="${lib.dir}/${jsr181-api}"/>   
+<available file="${lib.dir}/${jsr250-api}"/>   
+<available file="${lib.dir}/${resolver}"/>
+<available file="${lib.dir}/${saaj-api}"/>
+<available file="${lib.dir}/${saaj-impl}"/>
+<available file="${lib.dir}/${sjsxp}"/>
+<available file="${lib.dir}/${stax-ex}"/>
+<available file="${lib.dir}/${streambuffer}"/>
+
+<available file="${lib.dir}/${jodconverter}"/> 
+<available file="${lib.dir}/${juh}"/>
+<available file="${lib.dir}/${jurt}"/>
+<available file="${lib.dir}/${ridl}"/>
+<available file="${lib.dir}/${slf4j}"/>
+<available file="${lib.dir}/${slf4j-impl}"/>
+<available file="${lib.dir}/${unoil}"/>
 </and>
 </condition>
 
@@ -137,6 +188,7 @@
   <delete quiet="true" file="${lib.dir}/log4j-1.2.8.jar"/>
   <delete quiet="true" file="${lib.dir}/wsdl4j.jar"/>
   <delete quiet="true" file="${lib.dir}/fetaEngine.jar"/>
+  <delete quiet="true" file="${lib.dir}/commons-io-1.0.jar"/>
 
   <!-- get them... -->
   <get src="${remote.dir}/${alltools2}"         dest="${lib.dir}/${alltools2}"  usetimestamp="true"/>
@@ -166,8 +218,6 @@
   <get src="${remote.dir}/${servlet}"           dest="${lib.dir}/${servlet}" usetimestamp="true"/>
   <get src="${remote.dir}/${activation}"        dest="${lib.dir}/${activation}" usetimestamp="true"/>
 
-  <get src="${remote.dir}/${jodconverter}"        dest="${lib.dir}/${jodconverter}" usetimestamp="true"/>
-
   <get src="${remote.dir}/${dns-java}"          dest="${lib.dir}/${dns-java}" usetimestamp="true"/>
   <get src="${remote.dir}/${castor}"            dest="${lib.dir}/${castor}" usetimestamp="true"/>
   
@@ -196,4 +246,29 @@
   <get src="${remote.dir}/${jcalendar}"         dest="${lib.dir}/${jcalendar}" usetimestamp="true"/>
   <get src="${remote.dir}/${icis-pedigree}"     dest="${lib.dir}/${icis-pedigree}" usetimestamp="true"/>
 
+  <get src="${remote.dir}/${FastInfoset}" dest="${lib.dir}/${FastInfoset}" usetimestamp="true"/>
+  <get src="${remote.dir}/${http}" dest="${lib.dir}/${http}" usetimestamp="true"/>
+  <get src="${remote.dir}/${jaxb-api}" dest="${lib.dir}/${jaxb-api}" usetimestamp="true"/>
+  <get src="${remote.dir}/${jaxb-impl}" dest="${lib.dir}/${jaxb-impl}" usetimestamp="true"/>
+  <get src="${remote.dir}/${jaxb-xjc}" dest="${lib.dir}/${jaxb-xjc}" usetimestamp="true"/>
+  <get src="${remote.dir}/${jaxws-api}" dest="${lib.dir}/${jaxws-api}" usetimestamp="true"/>
+  <get src="${remote.dir}/${jaxws-rt}" dest="${lib.dir}/${jaxws-rt}" usetimestamp="true"/>
+  <get src="${remote.dir}/${jaxws-tools}" dest="${lib.dir}/${jaxws-tools}" usetimestamp="true"/>
+  <get src="${remote.dir}/${jsr173_api}" dest="${lib.dir}/${jsr173_api}" usetimestamp="true"/>
+  <get src="${remote.dir}/${jsr181-api}" dest="${lib.dir}/${jsr181-api}" usetimestamp="true"/>   
+  <get src="${remote.dir}/${jsr250-api}" dest="${lib.dir}/${jsr250-api}" usetimestamp="true"/>   
+  <get src="${remote.dir}/${resolver}" dest="${lib.dir}/${resolver}" usetimestamp="true"/>
+  <get src="${remote.dir}/${saaj-api}" dest="${lib.dir}/${saaj-api}" usetimestamp="true"/>
+  <get src="${remote.dir}/${saaj-impl}" dest="${lib.dir}/${saaj-impl}" usetimestamp="true"/>
+  <get src="${remote.dir}/${sjsxp}" dest="${lib.dir}/${sjsxp}" usetimestamp="true"/>
+  <get src="${remote.dir}/${stax-ex}" dest="${lib.dir}/${stax-ex}" usetimestamp="true"/>
+  <get src="${remote.dir}/${streambuffer}" dest="${lib.dir}/${streambuffer}" usetimestamp="true"/>
+
+  <get src="${remote.dir}/${jodconverter}"        dest="${lib.dir}/${jodconverter}" usetimestamp="true"/>
+  <get src="${remote.dir}/${juh}" dest="${lib.dir}/${juh}" usetimestamp="true"/>
+  <get src="${remote.dir}/${jurt}" dest="${lib.dir}/${jurt}" usetimestamp="true"/>
+  <get src="${remote.dir}/${ridl}" dest="${lib.dir}/${ridl}" usetimestamp="true"/>
+  <get src="${remote.dir}/${slf4j}" dest="${lib.dir}/${slf4j}" usetimestamp="true"/>
+  <get src="${remote.dir}/${slf4j-impl}" dest="${lib.dir}/${slf4j-impl}" usetimestamp="true"/>
+  <get src="${remote.dir}/${unoil}" dest="${lib.dir}/${unoil}" usetimestamp="true"/>
 </target>




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