[MOBY-guts] biomoby commit

[Eddie Kawas]

kawas
Thu Feb 21 12:54:56 EST 2008
Update of /home/repository/moby/moby-live/Perl/MOBY-Server/lib/MOBY/lsid/authority
In directory dev.open-bio.org:/tmp/cvs-serv26968/Perl/MOBY-Server/lib/MOBY/lsid/authority

Modified Files:
	MobyMetadataResolver.pm 
Log Message:
update of pod - found warnings when i ran podchecker so i am correcting them
moby-live/Perl/MOBY-Server/lib/MOBY/lsid/authority MobyMetadataResolver.pm,1.1,1.2
===================================================================
RCS file: /home/repository/moby/moby-live/Perl/MOBY-Server/lib/MOBY/lsid/authority/MobyMetadataResolver.pm,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Perl/MOBY-Server/lib/MOBY/lsid/authority/MobyMetadataResolver.pm	2008/02/21 00:21:28	1.1
+++ /home/repository/moby/moby-live/Perl/MOBY-Server/lib/MOBY/lsid/authority/MobyMetadataResolver.pm	2008/02/21 17:54:56	1.2
@@ -27,16 +27,18 @@
 =head1 SYNOPSIS
 
 	use MOBY::lsid::authority::MobyMetadataResolver;
-	
+
 	# create a LS::Service::DataService and pass it our handler
 	my $metadata = LS::Service::DataService->new();
 	$metadata->addNamespace( MobyNamespaceType->new() );
-	
+
 =head1 DESCRIPTION
 
 This module implements the subroutines needed to implement
 an LSID authority service that handles this namespace. 
 
+=cut
+
 =head1 AUTHORS
 
  Edward Kawas (edward.kawas [at] gmail [dot] com)
@@ -75,7 +77,7 @@
 This routine has 2 parameters:
 	lsid - the LSID
 	format - output format <optional>
-	
+
  Example: getMetadata(LS::ID->new('urn:lsid:authority:namespace:object'));	
 
 A LS::Service::Response is returned if getMetadata is successful.
@@ -144,7 +146,7 @@
 	namespace - the LSID namespace
 	id - the LSID object
 	revision - the LSID revision
-	
+
  Example: lsidExists('someNamespace','someObject','someRevision');	
 
 If the thing pointed at by the lsid exists, then 1 is returned. Otherwise undef is returned.
@@ -188,12 +190,13 @@
 	namespace - the LSID namespace
 	id - the LSID object
 	revision - the LSID revision
-	
+
  Example: isLatest('someNamespace','someObject','someRevision');	
 
 If the lsid is the latest, then undef is returned. 
 If the lsid doesnt exist, then an empty string is returned.
 And if the lsid isnt the latest, then the latest lsid is returned. 
+
 =cut
 
 sub isLatest {
@@ -242,16 +245,18 @@
 =head1 SYNOPSIS
 
 	use MOBY::lsid::authority::MobyMetadataResolver;
-	
+
 	# create a LS::Service::DataService and pass it our handler
 	my $metadata = LS::Service::DataService->new();
 	$metadata->addNamespace( MobyServiceType->new() );
-	
+
 =head1 DESCRIPTION
 
 This module implements the subroutines needed to implement
 an LSID authority service that handles this namespace. 
 
+=cut
+
 =head1 AUTHORS
 
  Edward Kawas (edward.kawas [at] gmail [dot] com)
@@ -290,7 +295,7 @@
 This routine has 2 parameters:
 	lsid - the LSID
 	format - output format <optional>
-	
+
  Example: getMetadata(LS::ID->new('urn:lsid:authority:namespace:object'));	
 
 A LS::Service::Response is returned if getMetadata is successful.
@@ -358,7 +363,7 @@
 	namespace - the LSID namespace
 	id - the LSID object
 	revision - the LSID revision
-	
+
  Example: lsidExists('someNamespace','someObject','someRevision');	
 
 If the thing pointed at by the lsid exists, then 1 is returned. Otherwise undef is returned.
@@ -400,12 +405,13 @@
 	namespace - the LSID namespace
 	id - the LSID object
 	revision - the LSID revision
-	
+
  Example: isLatest('someNamespace','someObject','someRevision');	
 
 If the lsid is the latest, then undef is returned. 
 If the lsid doesnt exist, then an empty string is returned.
 And if the lsid isnt the latest, then the latest lsid is returned. 
+
 =cut
 
 
@@ -455,16 +461,18 @@
 =head1 SYNOPSIS
 
 	use MOBY::lsid::authority::MobyMetadataResolver;
-	
+
 	# create a LS::Service::DataService and pass it our handler
 	my $metadata = LS::Service::DataService->new();
 	$metadata->addNamespace( MobyObjectClass->new() );
-	
+
 =head1 DESCRIPTION
 
 This module implements the subroutines needed to implement
 an LSID authority service that handles this namespace. 
 
+=cut
+
 =head1 AUTHORS
 
  Edward Kawas (edward.kawas [at] gmail [dot] com)
@@ -503,7 +511,7 @@
 This routine has 2 parameters:
 	lsid - the LSID
 	format - output format <optional>
-	
+
  Example: getMetadata(LS::ID->new('urn:lsid:authority:namespace:object'));	
 
 A LS::Service::Response is returned if getMetadata is successful.
@@ -571,7 +579,7 @@
 	namespace - the LSID namespace
 	id - the LSID object
 	revision - the LSID revision
-	
+
  Example: lsidExists('someNamespace','someObject','someRevision');	
 
 If the thing pointed at by the lsid exists, then 1 is returned. Otherwise undef is returned.
@@ -612,12 +620,13 @@
 	namespace - the LSID namespace
 	id - the LSID object
 	revision - the LSID revision
-	
+
  Example: isLatest('someNamespace','someObject','someRevision');	
 
 If the lsid is the latest, then undef is returned. 
 If the lsid doesnt exist, then an empty string is returned.
 And if the lsid isnt the latest, then the latest lsid is returned. 
+
 =cut
 
 sub isLatest {
@@ -668,16 +677,18 @@
 =head1 SYNOPSIS
 
 	use MOBY::lsid::authority::MobyMetadataResolver;
-	
+
 	# create a LS::Service::DataService and pass it our handler
 	my $metadata = LS::Service::DataService->new();
 	$metadata->addNamespace( MobyServiceInstance->new() );
-	
+
 =head1 DESCRIPTION
 
 This module implements the subroutines needed to implement
 an LSID authority service that handles this namespace. 
 
+=cut
+
 =head1 AUTHORS
 
  Edward Kawas (edward.kawas [at] gmail [dot] com)
@@ -812,7 +823,7 @@
 This routine has 2 parameters:
 	lsid - the LSID
 	format - output format <optional>
-	
+
  Example: getMetadata(LS::ID->new('urn:lsid:authority:namespace:object'));	
 
 A LS::Service::Response is returned if getMetadata is successful.
@@ -896,7 +907,7 @@
 	namespace - the LSID namespace
 	id - the LSID object
 	revision - the LSID revision
-	
+
  Example: lsidExists('someNamespace','someObject','someRevision');	
 
 If the thing pointed at by the lsid exists, then 1 is returned. Otherwise undef is returned.
@@ -947,12 +958,13 @@
 	namespace - the LSID namespace
 	id - the LSID object
 	revision - the LSID revision
-	
+
  Example: isLatest('someNamespace','someObject','someRevision');	
 
 If the lsid is the latest, then undef is returned. 
 If the lsid doesnt exist, then an empty string is returned.
 And if the lsid isnt the latest, then the latest lsid is returned. 
+
 =cut
 
 sub isLatest {