[MOBY-guts] biomoby commit

[Martin Senger]

senger
Sat Apr 19 15:11:18 EDT 2008
Update of /home/repository/moby/moby-live/Java/src/Clients/help
In directory dev.open-bio.org:/tmp/cvs-serv10271/src/Clients/help

Modified Files:
	CreateMobyInput_usage.txt 
Log Message:

moby-live/Java/src/Clients/help CreateMobyInput_usage.txt,1.4,1.5
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/Clients/help/CreateMobyInput_usage.txt,v
retrieving revision 1.4
retrieving revision 1.5
diff -u -r1.4 -r1.5
--- /home/repository/moby/moby-live/Java/src/Clients/help/CreateMobyInput_usage.txt	2008/02/22 09:37:39	1.4
+++ /home/repository/moby/moby-live/Java/src/Clients/help/CreateMobyInput_usage.txt	2008/04/19 19:11:18	1.5
@@ -1,11 +1,21 @@
 Usage:
    run-create-input -h[elp]
-   run-create-input -data <data-type> [<moby-arguments>] [<other-arguments>]
-   run-create-input -service <service> [<moby-arguments>] [<other-arguments>]
-or (after setting CLASSPATH)
-   java CreateMobyInput -h[elp]
-   java CreateMobyInput -data <data-type> [<moby-arguments>] [<other-arguments>]
-   java CreateMobyInput -service <service> [<moby-arguments>] [<other-arguments>]
+   run-create-input -cachedir <dir> -data <data-type>  [<find-arguments>] [<other-arguments>]
+   run-create-input -cachedir <dir> -service <service> [<find-arguments>] [<other-arguments>]
+
+where -cachedir <dir>
+   is a mandatory argument; <dir> is a directory with local cache
+
+where <find-arguments> specify what Moby registry to connect to
+   -e <URL>
+      <URL> is an endpoint of a Moby registry
+   -uri <namespace>
+      <namespace> is a URI defining Moby registry's namespace
+ or
+   -registry <registry-synonym>
+      <registry-synonym> is a convenient way to specify a known registry;
+      the list of known registries can be obtained by the -lr option
+      from the MobyCmdLineClient (run-cmdline-client -lr)
 
 where
    -data <data-type-name>
@@ -16,14 +26,6 @@
       (e.g. -service Mabuhay)
    One of these parameters must be specified.
 
-where <moby-arguments> specify what Moby registry to connect to
-   -cachedir <dir>
-      <dir> is a directory with cached entities of a Moby registry
-   -e <URL>
-      <URL> is an endpoint of a Moby registry
-   -uri <namespace>
-      <namespace> is a URI defining Moby registry's namespace
-
 where <other-arguments> are:
 
    -q        ... quiet mode (prints only errors)