[MOBY-guts] biomoby commit

Paul Gordon gordonp at dev.open-bio.org
Sat Jun 30 22:21:57 UTC 2007

Sat Jun 30 18:21:57 EDT 2007
Update of /home/repository/moby/moby-live/Java/docs
In directory dev.open-bio.org:/tmp/cvs-serv13699

Modified Files:
Log Message:
Added journal article reference
moby-live/Java/docs Seahawk.html,1.7,1.8
RCS file: /home/repository/moby/moby-live/Java/docs/Seahawk.html,v
retrieving revision 1.7
retrieving revision 1.8
diff -u -r1.7 -r1.8
--- /home/repository/moby/moby-live/Java/docs/Seahawk.html	2007/06/21 18:33:43	1.7
+++ /home/repository/moby/moby-live/Java/docs/Seahawk.html	2007/06/30 22:21:56	1.8
@@ -11,6 +11,11 @@
     <h2>What is Seahawk?</h2>
+      While this page links to many extra technical details, the definitive 
+      reference for an explanation of Seahawk and its features is:
+<blockquote><tt>Gordon P.M.K., Sensen C.W. (2007) <a href="http://www.biomedcentral.com/content/pdf/1471-2105-8-208.pdf">Seahawk: Moving Beyond HTML in Web-based Bioinformatics Analysis</a>.  <a href="http://www.biomedcentral.com/bmcbioinformatics/"><i>BMC Bioinformatics</i></a> 8:208. <a
+href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=17577405&query_hl=1&itool=pubmed_DocSum">Medline</a> </tt></blockquote>
       Seahawk is a Java applet (or application component) that allows a <i>na&iuml;ve</i> user to:
         <li>Load text, HTML, Rich Text, or MOBY XML files from their local disk or a Web site</li>
@@ -30,11 +35,11 @@
     <h2>What is not?</h2>
-      Seahawk is not a visual programming environment for workflows. For that kind of functionality, please see
-      <a href="taverna/guide/index.html">Taverna</a>, or 
+      Seahawk is not a visual programming environment for workflows, but rather allows workflow
+      construction by example (as opposed to  <a href="http://taverna.sourceforge.net/">Taverna</a> or 
       <a href="http://lipm-bioinfo.toulouse.inra.fr/remora/cgi/remora.cgi">Remora</a>.  
       It is not for deploying services or seeing the guts of MOBY Objects
-      and service calls: please see <a href="Dashboard.html">Dashboard</a>.
+      and service calls: for this please see <a href="Dashboard.html">Dashboard</a>.

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