[MOBY-guts] biomoby commit

Sat Jun 9 22:05:52 UTC 2007

gordonp
Sat Jun  9 18:05:52 EDT 2007
Update of /home/repository/moby/moby-live/Java/src/main/ca/ucalgary/seahawk/gui
In directory dev.open-bio.org:/tmp/cvs-serv5486/src/main/ca/ucalgary/seahawk/gui

Modified Files:
	MobyContentPane.java 
Log Message:
Removed debug statement
moby-live/Java/src/main/ca/ucalgary/seahawk/gui MobyContentPane.java,1.9,1.10
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/ca/ucalgary/seahawk/gui/MobyContentPane.java,v
retrieving revision 1.9
retrieving revision 1.10
diff -u -r1.9 -r1.10

--- /home/repository/moby/moby-live/Java/src/main/ca/ucalgary/seahawk/gui/MobyContentPane.java	2007/06/08 20:30:21	1.9
+++ /home/repository/moby/moby-live/Java/src/main/ca/ucalgary/seahawk/gui/MobyContentPane.java	2007/06/09 22:05:52	1.10
@@ -237,6 +237,7 @@
 		    return;
 		}
 		catch(Exception e){
+		    e.printStackTrace();
 		    status.setText("Note: There was an error transforming the MOBY data " +
 				   "into presentation form, it may not be displayed correctly");
 		    logger.error("Note: There was an error transforming the MOBY data " +
@@ -308,15 +309,16 @@
 		    logger.error("Failure in loading MOBYfied binary data:\n" + e);
 		}
 		// Shouldn't get here unless either not binary, or the binary data load failed
-		System.err.println("Is plain text");
 		editorPane.setContentType("text/html");
 		String body = getInputStreamContents(url.openStream());
 		// Is it already HTML?
 		if(body.toLowerCase().indexOf("<html") != -1){
 		    resultBuffer = new StringBuffer(body);
+		    editorPane.getDocument().putProperty(javax.swing.text.Document.StreamDescriptionProperty, url);
 		}
 		// Otherwise it needs preformatting to get a fixed width font
 		else{
+		    //System.err.println("Is plain text");
 		    resultBuffer = new StringBuffer("<html><body><pre>"+
 						    body.replaceAll("&", "&amp;").replaceAll("<","&lt;")+
 						    "</pre></body></html>");


