[MOBY-guts] biomoby commit

[Paul Gordon]

gordonp
Fri Jan 19 13:32:36 EST 2007
Update of /home/repository/moby/moby-live/Java/docs
In directory dev.open-bio.org:/tmp/cvs-serv10600/docs

Modified Files:
	DataPackageInAnger.html 
Log Message:
Fixed typos in DNASequence creation
moby-live/Java/docs DataPackageInAnger.html,1.2,1.3
===================================================================
RCS file: /home/repository/moby/moby-live/Java/docs/DataPackageInAnger.html,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- /home/repository/moby/moby-live/Java/docs/DataPackageInAnger.html	2006/08/01 03:42:26	1.2
+++ /home/repository/moby/moby-live/Java/docs/DataPackageInAnger.html	2007/01/19 18:32:36	1.3
@@ -133,12 +133,12 @@
 MobyDataComposite dnaSeqObj = new MobyDataComposite(dnaType,           //type 
                                                     giNS,              // namespace
                                                     "123456",          //id
-                                                    "Sequence", "ATG", //begin (articleName, value) pairs
+                                                    "SequenceString", "ATG", //begin (articleName, value) pairs
                                                     "Length", "3");
 </pre></code></blockquote>
       Note that the constructor will automatically turn the value argument into a <code>java.lang.String</code> 
       if it isn't already, then call the <code>MobyDataObject.createInstanceFromString</code> shown earlier with the
-      datatype specified in the ontology (moby:String for Sequence and moby:Integer for Length).  
+      datatype specified in the ontology (moby:String for SequenceString and moby:Integer for Length).  
    </p>
 
    <p>If the value argument was already a <code>MobyDataObject</code> this process is avoided,
@@ -148,7 +148,7 @@
 <blockquote><code><pre>
 MobyDataString seqString = new MobyDataString("ATG");
 MobyDataComposite dnaSeqObj = new MobyDataComposite(dnaType, giNS, "123456", 
-                                                    "Sequence", seqString,
+                                                    "SequenceString", seqString,
                                                     "Length", "3");
 </pre></code></blockquote> 
    </p>