[MOBY-guts] biomoby commit

Wed Dec 5 15:27:30 UTC 2007

kawas
Wed Dec  5 10:27:30 EST 2007
Update of /home/repository/moby/moby-live/Java/docs/taverna/guide
In directory dev.open-bio.org:/tmp/cvs-serv22464/Java/docs/taverna/guide

Modified Files:
	index.html 
Log Message:
updated some of the new features and fixed the formatting of one of the faq items
moby-live/Java/docs/taverna/guide index.html,1.14,1.15
===================================================================
RCS file: /home/repository/moby/moby-live/Java/docs/taverna/guide/index.html,v
retrieving revision 1.14
retrieving revision 1.15
diff -u -r1.14 -r1.15

--- /home/repository/moby/moby-live/Java/docs/taverna/guide/index.html	2006/10/10 17:01:26	1.14
+++ /home/repository/moby/moby-live/Java/docs/taverna/guide/index.html	2007/12/05 15:27:30	1.15
@@ -10,7 +10,7 @@
 </head>
 
 <body>
-<h1>How to use the BioMoby plugin in Taverna (Updated October 2006) <a name="top"></a></h1>
+<h1>How to use the BioMoby plugin in Taverna (Updated December 2007) <a name="top"></a></h1>
 <blockquote>
 	<h3>Table of Contents</h3>
 	<blockquote>
@@ -58,6 +58,8 @@
 	  <ul>
    	      <li>Secondary parameters are now supported.</li>
    	      <li>New ways to parse service outputs.</li>
+   	      <li>Ability to add datatype parsers from the &apos;Advanced Model Explorer&apos;</li>
+   	      <li>Caching of Services/Datatypes from different registries that should aide in improved loading times.</li>
 		  <li>Service notes and service exceptions are no longer removed from messages so that you<br>
 		    can view them.</li>
 		  <li>A new output port for Moby collections called 'AsSimples'. This port breaks apart<br>
@@ -300,14 +302,14 @@
       There are 3 different types of output ports that Moby services utilize and 2 different types of input ports (excluding the legacy ports<br>
         'input' and 'output'.<br>
         <pre class="script">
-        <em><strong>Moby Service Output</strong></em> ----Connects to ---&gt; <em><strong>Moby Service Input</strong></em>
-       	
-     	        1  Simple				   			Simple
- 	    		2  Simple				 			Collection
-			    3  Collection			   			Simple
-     		    4  Collection			 			Collection
-            	5  CollectionAsSimples	           	Simples
-			    6  CollectionAsSimples		 		Collection
+      <em><strong>Moby Service Output</strong></em> ----Connects to ---&gt; <em><strong>Moby Service Input</strong></em>
+        
+              1  Simple                           Simple
+              2  Simple                           Collection
+              3  Collection                       Simple
+              4  Collection                       Collection
+              5  CollectionAsSimples              Simples
+              6  CollectionAsSimples              Collection
 		</pre>
         A <em><strong>Simple</strong></em> is a datatype that is not contained within a collection, i.e. do not have a name that contains '(Collection -'.<br>
         A <em><strong>CollectionAsSimples</strong></em> is an output port that contains a Taverna style List of the individuals in a Moby Collection.<br>


