[MOBY-guts] biomoby commit

[Paul Gordon]

gordonp
Thu Dec  7 11:37:36 EST 2006
Update of /home/repository/moby/moby-live/Java/src/main/org/biomoby/service/test
In directory dev.open-bio.org:/tmp/cvs-serv29629/src/main/org/biomoby/service/test

Modified Files:
	MobyServletTestCase.java mobyAASeq.xml 
Log Message:
Updates to secondary article handling
moby-live/Java/src/main/org/biomoby/service/test MobyServletTestCase.java,1.1,1.2 mobyAASeq.xml,1.1,1.2
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/service/test/MobyServletTestCase.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/service/test/MobyServletTestCase.java	2006/12/06 16:07:10	1.1
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/service/test/MobyServletTestCase.java	2006/12/07 16:37:36	1.2
@@ -218,12 +218,10 @@
     }
 
     public void testAsync(){
+	// TODO
     }
 
-    public void testRegister(){
-    }
-
-    public void testUnregister(){
+    public void testSecondaryParams(){
     }
 
     /**
@@ -235,6 +233,7 @@
  	suite.addTest(new MobyServletTestCase("testRDF"));
  	suite.addTest(new MobyServletTestCase("testRequestChain")); 
  	suite.addTest(new MobyServletTestCase("testMain"));
+ 	suite.addTest(new MobyServletTestCase("testSecondaryParams"));
  	suite.addTest(new MobyServletTestCase("testServletTester"));
         return suite;
     }

===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/service/test/mobyAASeq.xml,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/service/test/mobyAASeq.xml	2006/12/06 16:07:10	1.1
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/service/test/mobyAASeq.xml	2006/12/07 16:37:36	1.2
@@ -8,6 +8,11 @@
           <Integer namespace='' id='' articleName='Length'>499</Integer>
         </AminoAcidSequence>
       </moby:Simple>
+      <moby:Parameter articleName='filter'><Value>true</Value></moby:Parameter>	
+      <moby:Parameter articleName='hits'><Value>100</Value></moby:Parameter>	
+      <moby:Parameter articleName='db'><Value>nr</Value></moby:Parameter>	
+      <moby:Parameter articleName='threshold'><Value>1.0e-5</Value></moby:Parameter>	
+      <moby:Parameter articleName='since'><Value>2005-08-13</Value></moby:Parameter>	
     </moby:mobyData>
   </moby:mobyContent>
 </moby:MOBY>