[MOBY-guts] biomoby commit
Martin Senger
senger at pub.open-bio.org
Mon Sep 19 08:08:32 UTC 2005
senger
Mon Sep 19 04:08:32 EDT 2005
Update of /home/repository/moby/moby-live/Java/src/config/templates
In directory pub.open-bio.org:/tmp/cvs-serv29075/src/config/templates
Modified Files:
DataTypeTemplate.java MembersHASTemplate.java
MethodsHASTemplate.java MethodsHAS_string_Template.java
ServicePISetTemplate.java ServicePISimpleTemplate.java
ServicePOSetTemplate.java ServicePOSimpleTemplate.java
ServiceParameterTemplate.java ServiceSkeletonTemplate.java
ToStringHASTemplate.java ToXMLHASTemplate.java
Log Message:
caching also namespaces
moby-live/Java/src/config/templates DataTypeTemplate.java,1.1,1.2 MembersHASTemplate.java,1.1,1.2 MethodsHASTemplate.java,1.1,1.2 MethodsHAS_string_Template.java,1.1,1.2 ServicePISetTemplate.java,1.1,1.2 ServicePISimpleTemplate.java,1.1,1.2 ServicePOSetTemplate.java,1.1,1.2 ServicePOSimpleTemplate.java,1.1,1.2 ServiceParameterTemplate.java,1.1,1.2 ServiceSkeletonTemplate.java,1.1,1.2 ToStringHASTemplate.java,1.1,1.2 ToXMLHASTemplate.java,1.1,1.2
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/templates/DataTypeTemplate.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/config/templates/DataTypeTemplate.java 2005/08/26 06:27:03 1.1
+++ /home/repository/moby/moby-live/Java/src/config/templates/DataTypeTemplate.java 2005/09/19 08:08:32 1.2
@@ -6,11 +6,6 @@
package org.biomoby.shared.datatypes;
-import org.biomoby.shared.MobyException;
-import org.jdom.Element;
-import java.util.Vector;
-import java.util.Enumeration;
-
/**
* <b>Data type name:</b> @DATATYPE at . <br>
* <b>Authority:</b> @AUTHORITY@ <br>
@@ -57,8 +52,8 @@
/**************************************************************************
*
*************************************************************************/
- public Element toXML() {
- Element elem_I_am_sorry_that_this_produces_a_warning = super.toXML();
+ public org.jdom.Element toXML() {
+ org.jdom.Element elem_I_am_sorry_that_this_produces_a_warning = super.toXML();
elem_I_am_sorry_that_this_produces_a_warning.setName (DATA_TYPE_NAME);
@TO_XML@
return elem_I_am_sorry_that_this_produces_a_warning;
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/templates/MembersHASTemplate.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/config/templates/MembersHASTemplate.java 2005/08/26 06:27:03 1.1
+++ /home/repository/moby/moby-live/Java/src/config/templates/MembersHASTemplate.java 2005/09/19 08:08:32 1.2
@@ -1,5 +1,5 @@
/** An article name for a member of this object. */
public static final String ARTICLE_NAME_ at ESC_UPPER_ARTICLE_NAME@ = "@ARTICLE_NAME@";
// elements are of type @CHILDTYPE_NAME@
- protected Vector @ESC_ARTICLE_NAME@ = new Vector();
+ protected java.util.Vector @ESC_ARTICLE_NAME@ = new java.util.Vector();
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/templates/MethodsHASTemplate.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/config/templates/MethodsHASTemplate.java 2005/08/26 06:27:03 1.1
+++ /home/repository/moby/moby-live/Java/src/config/templates/MethodsHASTemplate.java 2005/09/19 08:08:32 1.2
@@ -19,7 +19,7 @@
* only one value
*************************************************************************/
public void set_ at ESC_ARTICLE_NAME@ (@CHILDTYPE_NAME@[] value) {
- this. at ESC_ARTICLE_NAME@ = new Vector();
+ this. at ESC_ARTICLE_NAME@ = new java.util.Vector();
for (int i = 0; i < value.length; i++)
set_ at ESC_ARTICLE_NAME@ (value[i]);
}
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/templates/MethodsHAS_string_Template.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/config/templates/MethodsHAS_string_Template.java 2005/08/26 06:27:03 1.1
+++ /home/repository/moby/moby-live/Java/src/config/templates/MethodsHAS_string_Template.java 2005/09/19 08:08:32 1.2
@@ -21,7 +21,7 @@
* only one value
*************************************************************************/
public void set_ at ESC_ARTICLE_NAME@ (String[] value) {
- this. at ESC_ARTICLE_NAME@ = new Vector();
+ this. at ESC_ARTICLE_NAME@ = new java.util.Vector();
for (int i = 0; i < value.length; i++)
set_ at ESC_ARTICLE_NAME@ (value[i]);
}
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/templates/ServicePISetTemplate.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/config/templates/ServicePISetTemplate.java 2005/08/26 06:27:03 1.1
+++ /home/repository/moby/moby-live/Java/src/config/templates/ServicePISetTemplate.java 2005/09/19 08:08:32 1.2
@@ -3,10 +3,10 @@
*
* @param request represents input data coming from a client
* @return a type specific object (that is known to this service)
- * @throws MobyException if something goes wrong
+ * @throws org.biomoby.shared.MobyException if something goes wrong
*************************************************************************/
public @DATATYPE@[] get_ at ESC_ARTICLE_NAME@Set (MobyJob request)
- throws MobyException {
+ throws org.biomoby.shared.MobyException {
return (@DATATYPE@[])request.getDataSet ("@ARTICLE_NAME@", "@DATATYPE@");
}
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/templates/ServicePISimpleTemplate.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/config/templates/ServicePISimpleTemplate.java 2005/08/26 06:27:03 1.1
+++ /home/repository/moby/moby-live/Java/src/config/templates/ServicePISimpleTemplate.java 2005/09/19 08:08:32 1.2
@@ -3,9 +3,9 @@
*
* @param request represents input data coming from a client
* @return a type specific object (that is known to this service)
- * @throws MobyException if something goes wrong
+ * @throws org.biomoby.shared.MobyException if something goes wrong
*************************************************************************/
public @DATATYPE@ get_ at ESC_ARTICLE_NAME@ (MobyJob request)
- throws MobyException {
+ throws org.biomoby.shared.MobyException {
return (@DATATYPE@)request.getData ("@ARTICLE_NAME@", "@DATATYPE@");
}
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/templates/ServicePOSetTemplate.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/config/templates/ServicePOSetTemplate.java 2005/08/26 06:27:03 1.1
+++ /home/repository/moby/moby-live/Java/src/config/templates/ServicePOSetTemplate.java 2005/09/19 08:08:32 1.2
@@ -3,10 +3,10 @@
*
* @param response represents output data that will go to a client
* @param values is to be stored in the 'response'
- * @throws MobyException if something goes wrong
+ * @throws org.biomoby.shared.MobyException if something goes wrong
*************************************************************************/
public void set_ at ESC_ARTICLE_NAME@Set (MobyJob response, @DATATYPE@[] values)
- throws MobyException {
+ throws org.biomoby.shared.MobyException {
response.setDataSet (values, "@ARTICLE_NAME@");
}
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/templates/ServicePOSimpleTemplate.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/config/templates/ServicePOSimpleTemplate.java 2005/08/26 06:27:03 1.1
+++ /home/repository/moby/moby-live/Java/src/config/templates/ServicePOSimpleTemplate.java 2005/09/19 08:08:32 1.2
@@ -3,10 +3,10 @@
*
* @param response represents output data that will go to a client
* @param value is to be stored in the 'response'
- * @throws MobyException if something goes wrong
+ * @throws org.biomoby.shared.MobyException if something goes wrong
*************************************************************************/
public void set_ at ESC_ARTICLE_NAME@ (MobyJob response, @DATATYPE@ value)
- throws MobyException {
+ throws org.biomoby.shared.MobyException {
response.setData (value, "@ARTICLE_NAME@");
}
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/templates/ServiceParameterTemplate.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/config/templates/ServiceParameterTemplate.java 2005/08/26 06:27:03 1.1
+++ /home/repository/moby/moby-live/Java/src/config/templates/ServiceParameterTemplate.java 2005/09/19 08:08:32 1.2
@@ -4,10 +4,10 @@
*
* @param request represents input data coming from a client
* @return value of a "secondary" parameter
- * @throws MobyException if something goes wrong
+ * @throws org.biomoby.shared.MobyException if something goes wrong
*************************************************************************/
public String getParameter_ at ESC_ARTICLE_NAME@ (MobyJob request)
- throws MobyException {
+ throws org.biomoby.shared.MobyException {
return request.getParameter ("@ARTICLE_NAME@");
}
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/templates/ServiceSkeletonTemplate.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/config/templates/ServiceSkeletonTemplate.java 2005/08/26 06:27:03 1.1
+++ /home/repository/moby/moby-live/Java/src/config/templates/ServiceSkeletonTemplate.java 2005/09/19 08:08:32 1.2
@@ -4,8 +4,6 @@
package @PACKAGE_NAME@;
import org.biomoby.service.BaseService;
-import org.biomoby.shared.MobyException;
-import org.biomoby.shared.parser.MobyParameter;
import org.biomoby.shared.parser.MobyJob;
import org.biomoby.shared.parser.MobyPackage;
import org.biomoby.shared.datatypes.*;
@@ -61,7 +59,7 @@
// and return an XML back
return mobyOutput.toXML();
- } catch (MobyException e) {
+ } catch (org.biomoby.shared.MobyException e) {
return error (e.getMessage(), mobyOutput);
}
}
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/templates/ToStringHASTemplate.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/config/templates/ToStringHASTemplate.java 2005/08/26 06:27:03 1.1
+++ /home/repository/moby/moby-live/Java/src/config/templates/ToStringHASTemplate.java 2005/09/19 08:08:32 1.2
@@ -1,2 +1,2 @@
- for (Enumeration en = @ESC_ARTICLE_NAME at .elements(); en.hasMoreElements(); )
+ for (java.util.Enumeration en = @ESC_ARTICLE_NAME at .elements(); en.hasMoreElements(); )
buf_I_am_sorry_that_this_produces_a_warning.append ( ((@CHILDTYPE_NAME@)en.nextElement()).format (1) );
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/templates/ToXMLHASTemplate.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/config/templates/ToXMLHASTemplate.java 2005/08/26 06:27:03 1.1
+++ /home/repository/moby/moby-live/Java/src/config/templates/ToXMLHASTemplate.java 2005/09/19 08:08:32 1.2
@@ -1,2 +1,2 @@
- for (Enumeration en = @ESC_ARTICLE_NAME at .elements(); en.hasMoreElements(); )
+ for (java.util.Enumeration en = @ESC_ARTICLE_NAME at .elements(); en.hasMoreElements(); )
elem_I_am_sorry_that_this_produces_a_warning.addContent ( ((@CHILDTYPE_NAME@)en.nextElement()).toXML() );
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