[MOBY-guts] biomoby commit
Gary Schiltz
gss at pub.open-bio.org
Wed Nov 23 23:55:26 UTC 2005
gss
Wed Nov 23 18:55:25 EST 2005
Update of /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core
In directory pub.open-bio.org:/tmp/cvs-serv18130/WebRoot/ontologies/core
Modified Files:
outputURI oneLineDescription index.html operatesOn Subject.n3
name.n3 name oneLineDescription.n3 Subject
Added Files:
inputURI aboutURI metadata.n3 aboutURI.n3 inputURI.n3
outputURI.n3 metadata
Removed Files:
resourceAboutURI.n3 subjectProperty.n3 Service keyword
subjectProperty Service.n3 resourceAboutURI keyword.n3
Log Message:
Misc cleanup of ontology elements
s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core inputURI,NONE,1.1 aboutURI,NONE,1.1 metadata.n3,NONE,1.1 aboutURI.n3,NONE,1.1 inputURI.n3,NONE,1.1 outputURI.n3,NONE,1.1 metadata,NONE,1.1 outputURI,1.1,1.2 oneLineDescription,1.2,1.3 index.html,1.2,1.3 operatesOn,1.3,1.4 Subject.n3,1.1,1.2 name.n3,1.2,1.3 name,1.2,1.3 oneLineDescription.n3,1.2,1.3 Subject,1.1,1.2 resourceAboutURI.n3,1.1,NONE subjectProperty.n3,1.1,NONE Service,1.1,NONE keyword,1.1,NONE subjectProperty,1.1,NONE Service.n3,1.1,NONE resourceAboutURI,1.1,NONE keyword.n3,1.1,NONE
===================================================================
RCS file: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/outputURI,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/outputURI 2005/10/28 04:08:40 1.1
+++ /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/outputURI 2005/11/23 23:55:25 1.2
@@ -1,12 +1,12 @@
<rdf:RDF
- xmlns:moby="http://www.semanticmoby.org/ontologies/core/"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
- xmlns:owl="http://www.w3.org/2002/07/owl#" >
+ xmlns:owl="http://www.w3.org/2002/07/owl#"
+ xmlns:moby="http://www.semanticmoby.org/ontologies/core/" >
<rdf:Description rdf:about="http://www.semanticmoby.org/ontologies/core/outputURI">
- <rdfs:domain rdf:resource="http://www.semanticmoby.org/ontologies/core/Service"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#DatatypeProperty"/>
- <rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#string"/>
+ <rdfs:domain rdf:resource="http://www.semanticmoby.org/ontologies/core/Resource"/>
+ <rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#anyURI"/>
</rdf:Description>
-</rdf:RDF>
+</rdf:RDF>
\ No newline at end of file
===================================================================
RCS file: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/oneLineDescription,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/oneLineDescription 2005/10/28 04:08:40 1.2
+++ /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/oneLineDescription 2005/11/23 23:55:25 1.3
@@ -1,12 +1,12 @@
<rdf:RDF
- xmlns:moby="http://www.semanticmoby.org/ontologies/core/"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
- xmlns:owl="http://www.w3.org/2002/07/owl#" >
+ xmlns:owl="http://www.w3.org/2002/07/owl#"
+ xmlns:moby="http://www.semanticmoby.org/ontologies/core/" >
<rdf:Description rdf:about="http://www.semanticmoby.org/ontologies/core/oneLineDescription">
- <rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#string"/>
- <rdfs:domain rdf:resource="http://www.semanticmoby.org/ontologies/core/Service"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#DatatypeProperty"/>
+ <rdfs:domain rdf:resource="http://www.semanticmoby.org/ontologies/core/Resource"/>
+ <rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#string"/>
</rdf:Description>
-</rdf:RDF>
+</rdf:RDF>
\ No newline at end of file
===================================================================
RCS file: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/index.html,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/index.html 2005/10/28 04:08:40 1.2
+++ /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/index.html 2005/11/23 23:55:25 1.3
@@ -27,9 +27,9 @@
<tr>
<td>
<table border="1" cellpadding="3" cellspacing="0" >
-<tr><td><code>Service</code></td>
- <td><a href="Service.n3">N3</a></td>
- <td><a href="Service">RDF/XML</a></td></tr>
+<tr><td><code>Resource</code></td>
+ <td><a href="Resource.n3">N3</a></td>
+ <td><a href="Resource">RDF/XML</a></td></tr>
<tr><td><code>Graph</code></td>
<td><a href="Graph.n3">N3</a></td>
<td><a href="Graph">RDF/XML</a></td></tr>
@@ -51,12 +51,12 @@
<tr><td><code>oneLineDescription</code></td>
<td><a href="oneLineDescription.n3">N3</a></td>
<td><a href="oneLineDescription">RDF/XML</a></td></tr>
-<tr><td><code>resourceAboutURI</code></td>
- <td><a href="resourceAboutURI.n3">N3</a></td>
- <td><a href="resourceAboutURI">RDF/XML</a></td></tr>
-<tr><td><code>keyword</code></td>
- <td><a href="keyword.n3">N3</a></td>
- <td><a href="keyword">RDF/XML</a></td></tr>
+<tr><td><code>aboutURI</code></td>
+ <td><a href="aboutURI.n3">N3</a></td>
+ <td><a href="aboutURI">RDF/XML</a></td></tr>
+<tr><td><code>metadata</code></td>
+ <td><a href="metadata.n3">N3</a></td>
+ <td><a href="metadata">RDF/XML</a></td></tr>
<tr><td><code>operatesOn</code></td>
<td><a href="operatesOn.n3">N3</a></td>
<td><a href="operatesOn">RDF/XML</a></td></tr>
@@ -66,12 +66,6 @@
<tr><td><code>mapsTo</code></td>
<td><a href="mapsTo.n3">N3</a></td>
<td><a href="mapsTo">RDF/XML</a></td></tr>
-<tr><td><code>subjectProperty</code></td>
- <td><a href="subjectProperty.n3">N3</a></td>
- <td><a href="subjectProperty">RDF/XML</a></td></tr>
-<tr><td><code>objectProperty</code></td>
- <td><a href="objectProperty.n3">N3</a></td>
- <td><a href="objectProperty">RDF/XML</a></td></tr>
</table>
</td>
</tbody>
===================================================================
RCS file: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/operatesOn,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/operatesOn 2005/11/03 22:37:29 1.3
+++ /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/operatesOn 2005/11/23 23:55:25 1.4
@@ -4,33 +4,33 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:moby="http://www.semanticmoby.org/ontologies/core/" >
+ <rdf:Description rdf:nodeID="A0">
+ <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/>
+ <owl:unionOf rdf:nodeID="A1"/>
+ </rdf:Description>
+ <rdf:Description rdf:nodeID="A2">
+ <rdf:first rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Seq"/>
+ <rdf:rest rdf:nodeID="A3"/>
+ </rdf:Description>
<rdf:Description rdf:about="http://www.semanticmoby.org/ontologies/core/operatesOn">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#ObjectProperty"/>
- <rdfs:domain rdf:resource="http://www.semanticmoby.org/ontologies/core/Service"/>
+ <rdfs:domain rdf:resource="http://www.semanticmoby.org/ontologies/core/Resource"/>
<rdfs:range rdf:nodeID="A0"/>
</rdf:Description>
<rdf:Description rdf:nodeID="A1">
+ <rdf:first rdf:resource="http://www.semanticmoby.org/ontologies/core/Graph"/>
+ <rdf:rest rdf:nodeID="A4"/>
+ </rdf:Description>
+ <rdf:Description rdf:nodeID="A3">
<rdf:first rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Alt"/>
<rdf:rest rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#nil"/>
</rdf:Description>
- <rdf:Description rdf:nodeID="A2">
+ <rdf:Description rdf:nodeID="A5">
<rdf:first rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Bag"/>
- <rdf:rest rdf:nodeID="A3"/>
+ <rdf:rest rdf:nodeID="A2"/>
</rdf:Description>
<rdf:Description rdf:nodeID="A4">
<rdf:first rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#List"/>
- <rdf:rest rdf:nodeID="A2"/>
- </rdf:Description>
- <rdf:Description rdf:nodeID="A3">
- <rdf:first rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Seq"/>
- <rdf:rest rdf:nodeID="A1"/>
- </rdf:Description>
- <rdf:Description rdf:nodeID="A0">
- <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/>
- <owl:unionOf rdf:nodeID="A5"/>
- </rdf:Description>
- <rdf:Description rdf:nodeID="A5">
- <rdf:first rdf:resource="http://www.semanticmoby.org/ontologies/core/Graph"/>
- <rdf:rest rdf:nodeID="A4"/>
+ <rdf:rest rdf:nodeID="A5"/>
</rdf:Description>
</rdf:RDF>
\ No newline at end of file
===================================================================
RCS file: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/Subject.n3,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/Subject.n3 2004/07/15 20:27:14 1.1
+++ /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/Subject.n3 2005/11/23 23:55:25 1.2
@@ -10,9 +10,4 @@
a owl:Restriction ;
owl:onProperty moby:mapsTo ;
owl:minCardinality "1"^^xsd:nonNegativeInteger
- ] ;
- rdfs:subClassOf [
- a owl:Restriction ;
- owl:onProperty moby:subjectProperty ;
- owl:minCardinality "1"^^xsd:nonNegativeInteger
- ] .
+ ] .
\ No newline at end of file
===================================================================
RCS file: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/name.n3,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/name.n3 2005/10/28 04:08:40 1.2
+++ /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/name.n3 2005/11/23 23:55:25 1.3
@@ -9,7 +9,7 @@
rdfs:domain [
rdfs:subClassOf [
a owl:Class ;
- owl:unionOf (moby:Service moby:Subject moby:Object)
+ owl:unionOf (moby:Resource moby:Subject moby:Object)
]
];
rdfs:range xsd:string .
\ No newline at end of file
===================================================================
RCS file: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/name,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/name 2005/10/28 04:08:40 1.2
+++ /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/name 2005/11/23 23:55:25 1.3
@@ -9,23 +9,23 @@
<rdfs:domain rdf:nodeID="A0"/>
<rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#string"/>
</rdf:Description>
- <rdf:Description rdf:nodeID="A0">
- <rdfs:subClassOf rdf:nodeID="A1"/>
+ <rdf:Description rdf:nodeID="A1">
+ <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/>
+ <owl:unionOf rdf:nodeID="A2"/>
+ </rdf:Description>
+ <rdf:Description rdf:nodeID="A3">
+ <rdf:first rdf:resource="http://www.semanticmoby.org/ontologies/core/Subject"/>
+ <rdf:rest rdf:nodeID="A4"/>
</rdf:Description>
<rdf:Description rdf:nodeID="A2">
- <rdf:first rdf:resource="http://www.semanticmoby.org/ontologies/core/Service"/>
+ <rdf:first rdf:resource="http://www.semanticmoby.org/ontologies/core/Resource"/>
<rdf:rest rdf:nodeID="A3"/>
</rdf:Description>
+ <rdf:Description rdf:nodeID="A0">
+ <rdfs:subClassOf rdf:nodeID="A1"/>
+ </rdf:Description>
<rdf:Description rdf:nodeID="A4">
- <rdf:rest rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#nil"/>
<rdf:first rdf:resource="http://www.semanticmoby.org/ontologies/core/Object"/>
- </rdf:Description>
- <rdf:Description rdf:nodeID="A1">
- <owl:unionOf rdf:nodeID="A2"/>
- <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/>
- </rdf:Description>
- <rdf:Description rdf:nodeID="A3">
- <rdf:rest rdf:nodeID="A4"/>
- <rdf:first rdf:resource="http://www.semanticmoby.org/ontologies/core/Subject"/>
+ <rdf:rest rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#nil"/>
</rdf:Description>
</rdf:RDF>
\ No newline at end of file
===================================================================
RCS file: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/oneLineDescription.n3,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/oneLineDescription.n3 2005/10/28 04:08:40 1.2
+++ /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/oneLineDescription.n3 2005/11/23 23:55:25 1.3
@@ -6,5 +6,5 @@
moby:oneLineDescription
a owl:DatatypeProperty ;
- rdfs:domain moby:Service ;
+ rdfs:domain moby:Resource ;
rdfs:range xsd:string .
===================================================================
RCS file: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/Subject,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/Subject 2004/07/15 20:27:14 1.1
+++ /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/Subject 2005/11/23 23:55:25 1.2
@@ -1,22 +1,16 @@
<rdf:RDF
- xmlns:moby="http://www.semanticmoby.org/ontologies/core/"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
- xmlns:owl="http://www.w3.org/2002/07/owl#" >
- <rdf:Description rdf:nodeID="A0">
- <owl:minCardinality rdf:datatype="http://www.w3.org/2001/XMLSchema#nonNegativeInteger">1</owl:minCardinality>
- <owl:onProperty rdf:resource="http://www.semanticmoby.org/ontologies/core/subjectProperty"/>
- <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Restriction"/>
- </rdf:Description>
+ xmlns:owl="http://www.w3.org/2002/07/owl#"
+ xmlns:moby="http://www.semanticmoby.org/ontologies/core/" >
<rdf:Description rdf:about="http://www.semanticmoby.org/ontologies/core/Subject">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/>
- <rdfs:subClassOf rdf:nodeID="A1"/>
<rdfs:subClassOf rdf:nodeID="A0"/>
</rdf:Description>
- <rdf:Description rdf:nodeID="A1">
+ <rdf:Description rdf:nodeID="A0">
+ <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Restriction"/>
<owl:onProperty rdf:resource="http://www.semanticmoby.org/ontologies/core/mapsTo"/>
<owl:minCardinality rdf:datatype="http://www.w3.org/2001/XMLSchema#nonNegativeInteger">1</owl:minCardinality>
- <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Restriction"/>
</rdf:Description>
-</rdf:RDF>
+</rdf:RDF>
\ No newline at end of file
rcsdiff: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/RCS/resourceAboutURI.n3,v: No such file or directory
rcsdiff: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/RCS/subjectProperty.n3,v: No such file or directory
rcsdiff: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/RCS/Service,v: No such file or directory
rcsdiff: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/RCS/keyword,v: No such file or directory
rcsdiff: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/RCS/subjectProperty,v: No such file or directory
rcsdiff: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/RCS/Service.n3,v: No such file or directory
rcsdiff: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/RCS/resourceAboutURI,v: No such file or directory
rcsdiff: /home/repository/moby/s-moby/ref-impl/semanticmoby.org/WebRoot/ontologies/core/RCS/keyword.n3,v: No such file or directory
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