[MOBY-guts] biomoby commit
Martin Senger
senger at pub.open-bio.org
Sun Nov 20 12:30:51 UTC 2005
senger
Sun Nov 20 07:30:51 EST 2005
Update of /home/repository/moby/moby-live/Java/src/config
In directory pub.open-bio.org:/tmp/cvs-serv4966/src/config
Modified Files:
RDFagent_config.xml run-any-client.bat run-cache-client.bat
run-cmdline-client.bat run-dashboard run-dashboard.bat
run-digest-client.bat run-generator.bat run-graphs-client.bat
run-moby-parser.bat run-service.bat run-testing-central.bat
Log Message:
moby-live/Java/src/config RDFagent_config.xml,1.1,1.2 run-any-client.bat,1.5,1.6 run-cache-client.bat,1.3,1.4 run-cmdline-client.bat,1.4,1.5 run-dashboard,1.2,1.3 run-dashboard.bat,1.3,1.4 run-digest-client.bat,1.3,1.4 run-generator.bat,1.3,1.4 run-graphs-client.bat,1.3,1.4 run-moby-parser.bat,1.3,1.4 run-service.bat,1.3,1.4 run-testing-central.bat,1.3,1.4
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/RDFagent_config.xml,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/config/RDFagent_config.xml 2004/10/28 17:54:02 1.1
+++ /home/repository/moby/moby-live/Java/src/config/RDFagent_config.xml 2005/11/20 12:30:51 1.2
@@ -1,32 +1,33 @@
-<?xml version="1.0" encoding="ISO-8859-1"?>
+<?xml version="1.0" encoding="ISO-8859-1"?>
-<configFile>
- <moby>
- <adminEmail>mwilkinson at mrl.ubc.ca</adminEmail>
- <subject>RDFagent warning </subject>
- <errMessage></errMessage>
- <mailServer>mail.cbr.nrc.ca</mailServer>
- <mailUser></mailUser>
- <mailPswd></mailPswd>
- <from>rdf_agent at cbr.nrc.ca</from>
- </moby>
- <serviceProvider>
- <subject>RDFagent warning </subject>
- <errMesConnect>Connect was refused with HTTP code </errMesConnect>
- </serviceProvider>
- <serviceValidator>
- <db>
- <driver>com.mysql.jdbc.Driver</driver>
- <url>jdbc:mysql://localhost/mobycentral</url>
- <name>mobycentral</name>
- <user>moby</user>
- <passwd>moby</passwd>
- <port>3306</port>
- </db>
- <logFilePath>/RDFagent.log </logFilePath>
- <reportFilePath>/RDFagent_report</reportFilePath>
- <deletedFilePath>/RDFagent_delServices</deletedFilePath>
- <signURLFilePath>/RDFagent_signURLlist</signURLFilePath>
- <logLevel> 3 </logLevel>
- </serviceValidator>
+<configFile>
+ <moby>
+ <adminEmail>mwilkinson at mrl.ubc.ca</adminEmail>
+ <subject>RDFagent warning </subject>
+ <errMessage></errMessage>
+ <mailServer>mail.cbr.nrc.ca</mailServer>
+ <mailUser></mailUser>
+ <mailPswd></mailPswd>
+ <from>rdf_agent at cbr.nrc.ca</from>
+ </moby>
+ <serviceProvider>
+ <subject>RDFagent warning </subject>
+ <errMesConnect>Connect was refused with HTTP code </errMesConnect>
+ </serviceProvider>
+ <serviceValidator>
+ <db>
+ <driver>com.mysql.jdbc.Driver</driver>
+ <url>jdbc:mysql://localhost/mobycentral</url>
+ <name>mobycentral</name>
+ <user>moby</user>
+ <passwd>moby</passwd>
+ <port>3306</port>
+ </db>
+ <logFilePath>/RDFagent.log </logFilePath>
+ <reportFilePath>/RDFagent_report</reportFilePath>
+ <deletedFilePath>/RDFagent_delServices</deletedFilePath>
+ <signURLFilePath>/RDFagent_signURLlist</signURLFilePath>
+ <logLevel> 3 </logLevel>
+
+ </serviceValidator>
</configFile>
\ No newline at end of file
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/run-any-client.bat,v
retrieving revision 1.5
retrieving revision 1.6
diff -u -r1.5 -r1.6
--- /home/repository/moby/moby-live/Java/src/config/run-any-client.bat 2005/09/21 05:26:18 1.5
+++ /home/repository/moby/moby-live/Java/src/config/run-any-client.bat 2005/11/20 12:30:51 1.6
@@ -1,13 +1,14 @@
- at echo off
-
-set "PROJECT_HOME=@PROJECT_HOME@"
-cd "%PROJECT_HOME%"
-set CP=
-for %%i in (lib\*.jar) do call cp.bat %%i
-set CP=build\classes;%CP%
-set CP=build\Clients;%CP%
-set CP=build\others\datatypes;%CP%
-set CP=build\others\skeletons;%CP%
-set CP=build\others\samples;%CP%
-
-java -classpath "%CP%" %1 %2 %3 %4 %5 %6 %7 %8 %9
+ at echo off
+
+set "PROJECT_HOME=@PROJECT_HOME@"
+cd "%PROJECT_HOME%"
+set CP=
+for %%i in (lib\*.jar) do call cp.bat %%i
+for %%i in (lib\ant_home\lib\*.jar) do call cp.bat %%i
+set CP=build\classes;%CP%
+set CP=build\Clients;%CP%
+set CP=build\others\datatypes;%CP%
+set CP=build\others\skeletons;%CP%
+set CP=build\others\samples;%CP%
+
+java -classpath "%CP%" %*
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/run-cache-client.bat,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/moby-live/Java/src/config/run-cache-client.bat 2005/09/21 05:26:18 1.3
+++ /home/repository/moby/moby-live/Java/src/config/run-cache-client.bat 2005/11/20 12:30:51 1.4
@@ -1,10 +1,10 @@
- at echo off
-
-set "PROJECT_HOME=@PROJECT_HOME@"
-cd "%PROJECT_HOME%"
-set CP=
-for %%i in (lib\*.jar) do call cp.bat %%i
-set CP=build\classes;%CP%
-set CP=build\Clients;%CP%
-
-java -classpath "%CP%" CacheRegistryClient %1 %2 %3 %4 %5 %6 %7 %8 %9
+ at echo off
+
+set "PROJECT_HOME=@PROJECT_HOME@"
+cd "%PROJECT_HOME%"
+set CP=
+for %%i in (lib\*.jar) do call cp.bat %%i
+set CP=build\classes;%CP%
+set CP=build\Clients;%CP%
+
+java -classpath "%CP%" CacheRegistryClient %*
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/run-cmdline-client.bat,v
retrieving revision 1.4
retrieving revision 1.5
diff -u -r1.4 -r1.5
--- /home/repository/moby/moby-live/Java/src/config/run-cmdline-client.bat 2005/09/21 05:26:18 1.4
+++ /home/repository/moby/moby-live/Java/src/config/run-cmdline-client.bat 2005/11/20 12:30:51 1.5
@@ -7,4 +7,4 @@
set CP=build\classes;%CP%
set CP=build\Clients;%CP%
-java -classpath "%CP%" MobyCmdLineClient %1 %2 %3 %4 %5 %6 %7 %8 %9
+java -classpath "%CP%" MobyCmdLineClient %*
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/run-dashboard,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- /home/repository/moby/moby-live/Java/src/config/run-dashboard 2005/09/21 06:13:28 1.2
+++ /home/repository/moby/moby-live/Java/src/config/run-dashboard 2005/11/20 12:30:51 1.3
@@ -14,5 +14,6 @@
CLASSPATH=${PROJECT_HOME}/build/others/samples:$CLASSPATH
CLASSPATH=${PROJECT_HOME}/build/lib/dashboard-config.jar:$CLASSPATH
CLASSPATH=`echo ${PROJECT_HOME}/lib/*.jar | tr ' ' ':'`:$CLASSPATH
+CLASSPATH=`echo ${PROJECT_HOME}/lib/ant_home/lib/*.jar | tr ' ' ':'`:$CLASSPATH
exec java -cp $CLASSPATH org.biomoby.service.dashboard.Dashboard "$@"
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/run-dashboard.bat,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/moby-live/Java/src/config/run-dashboard.bat 2005/09/21 06:13:28 1.3
+++ /home/repository/moby/moby-live/Java/src/config/run-dashboard.bat 2005/11/20 12:30:51 1.4
@@ -1,14 +1,15 @@
- at echo off
-
-set "PROJECT_HOME=@PROJECT_HOME@"
-cd "%PROJECT_HOME%"
-set CP=
-for %%i in (lib\*.jar) do call cp.bat %%i
-set CP=build\classes;%CP%
-set CP=build\Clients;%CP%
-set CP=build\others\datatypes;%CP%
-set CP=build\others\skeletons;%CP%
-set CP=build\others\samples;%CP%
-set CP=build\lib\dashboard-config.jar;%CP%
-
-java -classpath "%CP%" org.biomoby.service.dashboard.Dashboard %1 %2 %3 %4 %5 %6 %7 %8 %9
+ at echo off
+
+set "PROJECT_HOME=@PROJECT_HOME@"
+cd "%PROJECT_HOME%"
+set CP=
+for %%i in (lib\*.jar) do call cp.bat %%i
+for %%i in (lib\ant_home\lib\*.jar) do call cp.bat %%i
+set CP=build\classes;%CP%
+set CP=build\Clients;%CP%
+set CP=build\others\datatypes;%CP%
+set CP=build\others\skeletons;%CP%
+set CP=build\others\samples;%CP%
+set CP=build\lib\dashboard-config.jar;%CP%
+
+java -classpath "%CP%" org.biomoby.service.dashboard.Dashboard %*
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/run-digest-client.bat,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/moby-live/Java/src/config/run-digest-client.bat 2005/09/21 05:26:18 1.3
+++ /home/repository/moby/moby-live/Java/src/config/run-digest-client.bat 2005/11/20 12:30:51 1.4
@@ -1,10 +1,10 @@
- at echo off
-
-set "PROJECT_HOME=@PROJECT_HOME@"
-cd "%PROJECT_HOME%"
-set CP=
-for %%i in (lib\*.jar) do call cp.bat %%i
-set CP=build\classes;%CP%
-set CP=build\Clients;%CP%
-
-java -classpath "%CP%" MobyDigestClient %1 %2 %3 %4 %5 %6 %7 %8 %9
+ at echo off
+
+set "PROJECT_HOME=@PROJECT_HOME@"
+cd "%PROJECT_HOME%"
+set CP=
+for %%i in (lib\*.jar) do call cp.bat %%i
+set CP=build\classes;%CP%
+set CP=build\Clients;%CP%
+
+java -classpath "%CP%" MobyDigestClient %*
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/run-generator.bat,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/moby-live/Java/src/config/run-generator.bat 2005/09/21 05:26:18 1.3
+++ /home/repository/moby/moby-live/Java/src/config/run-generator.bat 2005/11/20 12:30:51 1.4
@@ -1,12 +1,12 @@
- at echo off
-
-set "PROJECT_HOME=@PROJECT_HOME@"
-cd "%PROJECT_HOME%"
-set CP=
-for %%i in (lib\*.jar) do call cp.bat %%i
-set CP=build\classes;%CP%
-set CP=build\Clients;%CP%
-set CP=build\others\datatypes;%CP%
-set CP=build\others\skeletons;%CP%
-
-java -classpath "%CP%" MosesGenerators %1 %2 %3 %4 %5 %6 %7 %8 %9
+ at echo off
+
+set "PROJECT_HOME=@PROJECT_HOME@"
+cd "%PROJECT_HOME%"
+set CP=
+for %%i in (lib\*.jar) do call cp.bat %%i
+set CP=build\classes;%CP%
+set CP=build\Clients;%CP%
+set CP=build\others\datatypes;%CP%
+set CP=build\others\skeletons;%CP%
+
+java -classpath "%CP%" MosesGenerators %*
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/run-graphs-client.bat,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/moby-live/Java/src/config/run-graphs-client.bat 2005/09/21 05:26:18 1.3
+++ /home/repository/moby/moby-live/Java/src/config/run-graphs-client.bat 2005/11/20 12:30:51 1.4
@@ -1,10 +1,10 @@
- at echo off
-
-set "PROJECT_HOME=@PROJECT_HOME@"
-cd "%PROJECT_HOME%"
-set CP=
-for %%i in (lib\*.jar) do call cp.bat %%i
-set CP=build\classes;%CP%
-set CP=build\Clients;%CP%
-
-java -classpath "%CP%" MobyGraphs %1 %2 %3 %4 %5 %6 %7 %8 %9
+ at echo off
+
+set "PROJECT_HOME=@PROJECT_HOME@"
+cd "%PROJECT_HOME%"
+set CP=
+for %%i in (lib\*.jar) do call cp.bat %%i
+set CP=build\classes;%CP%
+set CP=build\Clients;%CP%
+
+java -classpath "%CP%" MobyGraphs %*
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/run-moby-parser.bat,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/moby-live/Java/src/config/run-moby-parser.bat 2005/09/21 05:26:18 1.3
+++ /home/repository/moby/moby-live/Java/src/config/run-moby-parser.bat 2005/11/20 12:30:51 1.4
@@ -1,11 +1,11 @@
- at echo off
-
-set "PROJECT_HOME=@PROJECT_HOME@"
-cd "%PROJECT_HOME%"
-set CP=
-for %%i in (lib\*.jar) do call cp.bat %%i
-set CP=build\classes;%CP%
-set CP=build\Clients;%CP%
-set CP=build\others\datatypes;%CP%
-
-java -classpath "%CP%" TestingMobyParser %1 %2 %3 %4 %5 %6 %7 %8 %9
+ at echo off
+
+set "PROJECT_HOME=@PROJECT_HOME@"
+cd "%PROJECT_HOME%"
+set CP=
+for %%i in (lib\*.jar) do call cp.bat %%i
+set CP=build\classes;%CP%
+set CP=build\Clients;%CP%
+set CP=build\others\datatypes;%CP%
+
+java -classpath "%CP%" TestingMobyParser %*
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/run-service.bat,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/moby-live/Java/src/config/run-service.bat 2005/09/21 05:26:18 1.3
+++ /home/repository/moby/moby-live/Java/src/config/run-service.bat 2005/11/20 12:30:51 1.4
@@ -1,13 +1,13 @@
- at echo off
-
-set "PROJECT_HOME=@PROJECT_HOME@"
-cd "%PROJECT_HOME%"
-set CP=
-for %%i in (lib\*.jar) do call cp.bat %%i
-set CP=build\classes;%CP%
-set CP=build\Clients;%CP%
-set CP=build\others\datatypes;%CP%
-set CP=build\others\skeletons;%CP%
-set CP=build\others\samples;%CP%
-
-java -classpath "%CP%" org.biomoby.client.BaseCmdLineClient %1 %2 %3 %4 %5 %6 %7 %8 %9
+ at echo off
+
+set "PROJECT_HOME=@PROJECT_HOME@"
+cd "%PROJECT_HOME%"
+set CP=
+for %%i in (lib\*.jar) do call cp.bat %%i
+set CP=build\classes;%CP%
+set CP=build\Clients;%CP%
+set CP=build\others\datatypes;%CP%
+set CP=build\others\skeletons;%CP%
+set CP=build\others\samples;%CP%
+
+java -classpath "%CP%" org.biomoby.client.BaseCmdLineClient %*
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/config/run-testing-central.bat,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/moby-live/Java/src/config/run-testing-central.bat 2005/09/21 05:26:18 1.3
+++ /home/repository/moby/moby-live/Java/src/config/run-testing-central.bat 2005/11/20 12:30:51 1.4
@@ -1,10 +1,10 @@
- at echo off
-
-set "PROJECT_HOME=@PROJECT_HOME@"
-cd "%PROJECT_HOME%"
-set CP=
-for %%i in (lib\*.jar) do call cp.bat %%i
-set CP=build\classes;%CP%
-set CP=build\Clients;%CP%
-
-java -classpath "%CP%" TestingCentral %1 %2 %3 %4 %5 %6 %7 %8 %9
+ at echo off
+
+set "PROJECT_HOME=@PROJECT_HOME@"
+cd "%PROJECT_HOME%"
+set CP=
+for %%i in (lib\*.jar) do call cp.bat %%i
+set CP=build\classes;%CP%
+set CP=build\Clients;%CP%
+
+java -classpath "%CP%" TestingCentral %*
More information about the MOBY-guts
mailing list