[MOBY-guts] biomoby commit
Martin Senger
senger at pub.open-bio.org
Sun Nov 20 12:30:52 UTC 2005
senger
Sun Nov 20 07:30:52 EST 2005
Update of /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/schema/example
In directory pub.open-bio.org:/tmp/cvs-serv4966/src/main/org/biomoby/shared/schema/example
Modified Files:
BasicGFFSequenceFeature.xml DNASequence.xml
DnaSequenceHolderxsd.xml Object.xml String.xml
Log Message:
moby-live/Java/src/main/org/biomoby/shared/schema/example BasicGFFSequenceFeature.xml,1.1,1.2 DNASequence.xml,1.1,1.2 DnaSequenceHolderxsd.xml,1.1,1.2 Object.xml,1.1,1.2 String.xml,1.1,1.2
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/schema/example/BasicGFFSequenceFeature.xml,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/schema/example/BasicGFFSequenceFeature.xml 2005/08/30 18:34:11 1.1
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/schema/example/BasicGFFSequenceFeature.xml 2005/11/20 12:30:52 1.2
@@ -1,27 +1,27 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<moby:BasicGFFSequenceFeature xmlns:moby="http://www.biomoby.org/moby" moby:articleName="" moby:id="" moby:namespace="">
-
-
- <moby:String moby:articleName="source" moby:id="Text" moby:namespace="Text">adf</moby:String>
- <moby:String moby:articleName="method" moby:id="Text" moby:namespace="Text">aaaa</moby:String>
- <moby:String moby:articleName="strand" moby:id="Text" moby:namespace="Text">arrr</moby:String>
- <moby:String moby:articleName="frame" moby:id="Text" moby:namespace="Text">aaaaaa</moby:String>
- <moby:String moby:articleName="phase" moby:id="Text" moby:namespace="Text">wwww</moby:String>
- <moby:String moby:articleName="reference" moby:id="Text" moby:namespace="Text">gggg</moby:String>
- <moby:Integer moby:articleName="start" moby:id="Text" moby:namespace="Text">112</moby:Integer>
- <moby:Integer moby:articleName="stop" moby:id="Text" moby:namespace="Text">113</moby:Integer>
-
- <moby:Float moby:articleName="score" moby:id="Text" moby:namespace="Text">3.14159E0</moby:Float>
-
- <moby:multi_key_value_pair moby:articleName="column9_tag_value" moby:id="String" moby:namespace="String">
- <moby:String moby:articleName="value" moby:id="Text" moby:namespace="Text">aaa</moby:String>
- <moby:String moby:articleName="key" moby:id="Text" moby:namespace="Text">aaasss</moby:String>
- </moby:multi_key_value_pair>
- <moby:multi_key_value_pair moby:articleName="column9_tag_value" moby:id="String" moby:namespace="String">
- <moby:String moby:articleName="key" moby:id="Text" moby:namespace="Text">asss</moby:String>
- <moby:String moby:articleName="value" moby:id="Text" moby:namespace="Text">aaat</moby:String>
-
- </moby:multi_key_value_pair>
-
-</moby:BasicGFFSequenceFeature>
-
+<?xml version="1.0" encoding="UTF-8"?>
+<moby:BasicGFFSequenceFeature xmlns:moby="http://www.biomoby.org/moby" moby:articleName="" moby:id="" moby:namespace="">
+
+
+ <moby:String moby:articleName="source" moby:id="Text" moby:namespace="Text">adf</moby:String>
+ <moby:String moby:articleName="method" moby:id="Text" moby:namespace="Text">aaaa</moby:String>
+ <moby:String moby:articleName="strand" moby:id="Text" moby:namespace="Text">arrr</moby:String>
+ <moby:String moby:articleName="frame" moby:id="Text" moby:namespace="Text">aaaaaa</moby:String>
+ <moby:String moby:articleName="phase" moby:id="Text" moby:namespace="Text">wwww</moby:String>
+ <moby:String moby:articleName="reference" moby:id="Text" moby:namespace="Text">gggg</moby:String>
+ <moby:Integer moby:articleName="start" moby:id="Text" moby:namespace="Text">112</moby:Integer>
+ <moby:Integer moby:articleName="stop" moby:id="Text" moby:namespace="Text">113</moby:Integer>
+
+ <moby:Float moby:articleName="score" moby:id="Text" moby:namespace="Text">3.14159E0</moby:Float>
+
+ <moby:multi_key_value_pair moby:articleName="column9_tag_value" moby:id="String" moby:namespace="String">
+ <moby:String moby:articleName="value" moby:id="Text" moby:namespace="Text">aaa</moby:String>
+ <moby:String moby:articleName="key" moby:id="Text" moby:namespace="Text">aaasss</moby:String>
+ </moby:multi_key_value_pair>
+ <moby:multi_key_value_pair moby:articleName="column9_tag_value" moby:id="String" moby:namespace="String">
+ <moby:String moby:articleName="key" moby:id="Text" moby:namespace="Text">asss</moby:String>
+ <moby:String moby:articleName="value" moby:id="Text" moby:namespace="Text">aaat</moby:String>
+
+ </moby:multi_key_value_pair>
+
+</moby:BasicGFFSequenceFeature>
+
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/schema/example/DNASequence.xml,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/schema/example/DNASequence.xml 2005/08/30 18:34:11 1.1
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/schema/example/DNASequence.xml 2005/11/20 12:30:52 1.2
@@ -6,4 +6,4 @@
</moby:DNASequence>
-
+
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/schema/example/DnaSequenceHolderxsd.xml,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/schema/example/DnaSequenceHolderxsd.xml 2005/08/30 18:34:11 1.1
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/schema/example/DnaSequenceHolderxsd.xml 2005/11/20 12:30:52 1.2
@@ -1,41 +1,41 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:moby="http://www.biomoby.org/moby" elementFormDefault="qualified" attributeFormDefault="qualified" targetNamespace="http://www.biomoby.org/moby">
- <xs:annotation>
- <xs:appinfo xml:lang="en">Generating a XML Schema for the Moby object DnaSequenceHolder. Fri Aug 12 10:25:26 PDT 2005. Eddie and Lixin</xs:appinfo>
- </xs:annotation>
- <xs:element name="DnaSequenceHolder" type="moby:DnaSequenceHolderType">
- <xs:unique name="first">
- <xs:selector xpath="moby:String|moby:Float|moby:Integer|moby:DateTime|moby:DNASequence" />
- <xs:field xpath="@moby:articleName" />
- </xs:unique>
- </xs:element>
- <!--holds 3 dnasequences-->
- <xs:complexType name="DnaSequenceHolderType">
- <xs:sequence>
- <!--Lightweight representation a DNA sequence-->
- <xs:element name="DNASequence" type="moby:DNASequenceTypep0" minOccurs="3" maxOccurs="3">
- <xs:unique name="unique_1">
- <xs:selector xpath="moby:String|moby:Float|moby:Integer|moby:DateTime" />
- <xs:field xpath="@moby:articleName" />
- </xs:unique>
- </xs:element>
- </xs:sequence>
- <xs:attribute name="namespace" use="required" form="qualified" type="xs:string" />
- <xs:attribute name="id" use="required" form="qualified" type="xs:string" />
- <xs:attribute name="articleName" use="required" form="qualified" />
- </xs:complexType>
- <!--This is definition of complexType DNASequenceTypep0-->
- <xs:simpleType name="articleType1">
- <xs:restriction base="xs:string">
- <xs:enumeration value="Sequence1" />
- <xs:enumeration value="Sequence2" />
- <xs:enumeration value="Sequence3" />
- </xs:restriction>
- </xs:simpleType>
- <xs:complexType name="DNASequenceTypep0">
- <xs:attribute name="namespace" use="required" form="qualified" type="xs:string" />
- <xs:attribute name="id" use="required" form="qualified" type="xs:string" />
- <xs:attribute name="articleName" use="required" type="moby:articleType1" />
- </xs:complexType>
-</xs:schema>
-
+<?xml version="1.0" encoding="UTF-8"?>
+<xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:moby="http://www.biomoby.org/moby" elementFormDefault="qualified" attributeFormDefault="qualified" targetNamespace="http://www.biomoby.org/moby">
+ <xs:annotation>
+ <xs:appinfo xml:lang="en">Generating a XML Schema for the Moby object DnaSequenceHolder. Fri Aug 12 10:25:26 PDT 2005. Eddie and Lixin</xs:appinfo>
+ </xs:annotation>
+ <xs:element name="DnaSequenceHolder" type="moby:DnaSequenceHolderType">
+ <xs:unique name="first">
+ <xs:selector xpath="moby:String|moby:Float|moby:Integer|moby:DateTime|moby:DNASequence" />
+ <xs:field xpath="@moby:articleName" />
+ </xs:unique>
+ </xs:element>
+ <!--holds 3 dnasequences-->
+ <xs:complexType name="DnaSequenceHolderType">
+ <xs:sequence>
+ <!--Lightweight representation a DNA sequence-->
+ <xs:element name="DNASequence" type="moby:DNASequenceTypep0" minOccurs="3" maxOccurs="3">
+ <xs:unique name="unique_1">
+ <xs:selector xpath="moby:String|moby:Float|moby:Integer|moby:DateTime" />
+ <xs:field xpath="@moby:articleName" />
+ </xs:unique>
+ </xs:element>
+ </xs:sequence>
+ <xs:attribute name="namespace" use="required" form="qualified" type="xs:string" />
+ <xs:attribute name="id" use="required" form="qualified" type="xs:string" />
+ <xs:attribute name="articleName" use="required" form="qualified" />
+ </xs:complexType>
+ <!--This is definition of complexType DNASequenceTypep0-->
+ <xs:simpleType name="articleType1">
+ <xs:restriction base="xs:string">
+ <xs:enumeration value="Sequence1" />
+ <xs:enumeration value="Sequence2" />
+ <xs:enumeration value="Sequence3" />
+ </xs:restriction>
+ </xs:simpleType>
+ <xs:complexType name="DNASequenceTypep0">
+ <xs:attribute name="namespace" use="required" form="qualified" type="xs:string" />
+ <xs:attribute name="id" use="required" form="qualified" type="xs:string" />
+ <xs:attribute name="articleName" use="required" type="moby:articleType1" />
+ </xs:complexType>
+</xs:schema>
+
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/schema/example/Object.xml,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/schema/example/Object.xml 2005/08/30 18:34:11 1.1
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/schema/example/Object.xml 2005/11/20 12:30:52 1.2
@@ -1,3 +1,3 @@
<?xml version="1.0" ?>
<moby:Object xmlns:moby="http://www.biomoby.org/moby" moby:namespace="" moby:id="99" moby:articleName=""/>
-
+
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/schema/example/String.xml,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/schema/example/String.xml 2005/08/30 18:34:11 1.1
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/schema/example/String.xml 2005/11/20 12:30:52 1.2
@@ -1,3 +1,3 @@
<?xml version="1.0" ?>
<moby:String xmlns:moby="http://www.biomoby.org/moby" moby:namespace="" moby:id="99" moby:articleName="">this is string</moby:String>
-
+
More information about the MOBY-guts
mailing list